Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL049714.1-201ENST00000466686 347 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 MTND4P2-201ENST00000507767 1203 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 FAM206BP-201ENST00000510179 541 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 SCARNA3-201ENST00000517097 143 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC067904.2-201ENST00000517322 1283 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL442163.2-201ENST00000553912 710 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 MTCYBP27-201ENST00000555160 670 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC013412.1-201ENST00000610687 192 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AC073968.1-201ENST00000618594 637 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AP005901.5-201ENST00000545779 1796 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 MTND4LP20-201ENST00000402379 270 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 VN1R108P-201ENST00000431580 830 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 SNRPGP13-201ENST00000442212 177 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC097499.1-201ENST00000444277 208 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 HMGN2P10-201ENST00000448085 265 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AL513124.1-201ENST00000450410 614 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC080013.2-201ENST00000460866 323 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 MTCYBP35-201ENST00000503630 1137 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC021087.2-201ENST00000504656 1203 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC116337.1-201ENST00000509680 687 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AP000873.5-201ENST00000533906 236 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 AC016925.2-201ENST00000605108 242 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 PISRT1-201ENST00000626175 531 ntBASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
TRAV30A0A087WSZ9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 U3.13-201ENST00000364804 214 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 MIR218-1-201ENST00000384999 110 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 NPM1P10-201ENST00000398310 865 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AL121882.1-201ENST00000422893 417 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 MTND6P13-201ENST00000443510 523 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 snoU13.15-201ENST00000459407 104 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC104164.3-201ENST00000467363 1258 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC114801.2-201ENST00000503825 781 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 RNA5SP137-201ENST00000516833 135 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC103810.8-201ENST00000607347 118 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AC108479.2-201ENST00000617314 601 ntBASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
TRAV30A0A087WSZ9 ZNF29P-201ENST00000225587 168 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 RNA5SP190-201ENST00000365222 118 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 MIR1303-201ENST00000408625 86 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 UBE2FP1-201ENST00000416536 447 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AL354695.1-201ENST00000427935 228 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AL359273.1-201ENST00000510918 627 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 RNU4-18P-201ENST00000516751 149 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AC087465.1-201ENST00000560574 245 ntBASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
TRAV30A0A087WSZ9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 RNU6-60P-201ENST00000364792 103 ntBASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 RNA5SP212-201ENST00000391223 107 ntBASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 MIR1290-201ENST00000408735 78 ntBASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV30A0A087WSZ9 HMGB1P18-201ENST00000438801 619 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms