Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.16□□□□□ -1.74
U3KQE9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 AP001029.2-203ENST00000589795 4910 ntBASIC4.16□□□□□ -1.74
U3KQE9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.16□□□□□ -1.74
U3KQE9 RN7SKP269-201ENST00000365545 319 ntBASIC4.16□□□□□ -1.74
U3KQE9 SNORA5.1-201ENST00000384275 131 ntBASIC4.16□□□□□ -1.74
U3KQE9 AC005522.1-201ENST00000395416 346 ntBASIC4.16□□□□□ -1.74
U3KQE9 RNU4-34P-201ENST00000410431 124 ntBASIC4.16□□□□□ -1.74
U3KQE9 RNU2-51P-201ENST00000410708 197 ntBASIC4.16□□□□□ -1.74
U3KQE9 BMS1P22-201ENST00000414726 313 ntBASIC4.16□□□□□ -1.74
U3KQE9 AC079809.1-201ENST00000415468 276 ntBASIC4.16□□□□□ -1.74
U3KQE9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.16□□□□□ -1.74
U3KQE9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.16□□□□□ -1.74
U3KQE9 AL356867.1-201ENST00000429623 299 ntBASIC4.16□□□□□ -1.74
U3KQE9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
U3KQE9 AC016700.2-201ENST00000446011 156 ntBASIC4.16□□□□□ -1.74
U3KQE9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.16□□□□□ -1.74
U3KQE9 RPL23AP24-201ENST00000458203 385 ntBASIC4.16□□□□□ -1.74
U3KQE9 RPL23AP65-201ENST00000475608 468 ntBASIC4.16□□□□□ -1.74
U3KQE9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.16□□□□□ -1.74
U3KQE9 OR7H2P-201ENST00000513483 306 ntBASIC4.16□□□□□ -1.74
U3KQE9 SNORD116-28-201ENST00000516123 91 ntBASIC4.16□□□□□ -1.74
U3KQE9 AP005660.1-201ENST00000522972 293 ntBASIC4.16□□□□□ -1.74
U3KQE9 MRPS18CP4-201ENST00000535821 231 ntBASIC4.16□□□□□ -1.74
U3KQE9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
U3KQE9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.16□□□□□ -1.74
U3KQE9 AL049872.1-201ENST00000556323 322 ntBASIC4.16□□□□□ -1.74
U3KQE9 AC010547.6-201ENST00000571789 193 ntBASIC4.16□□□□□ -1.74
U3KQE9 AP005403.1-201ENST00000579720 229 ntBASIC4.16□□□□□ -1.74
U3KQE9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.16□□□□□ -1.74
U3KQE9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.16□□□□□ -1.74
U3KQE9 AC105254.2-201ENST00000603636 436 ntBASIC4.16□□□□□ -1.74
U3KQE9 AL049539.1-201ENST00000611964 459 ntBASIC4.16□□□□□ -1.74
U3KQE9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
U3KQE9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.16□□□□□ -1.74
U3KQE9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.16□□□□□ -1.74
U3KQE9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
U3KQE9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.16□□□□□ -1.74
U3KQE9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.16□□□□□ -1.74
U3KQE9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
U3KQE9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.15□□□□□ -1.74
U3KQE9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
U3KQE9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
U3KQE9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
U3KQE9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.15□□□□□ -1.74
U3KQE9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
U3KQE9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
U3KQE9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
U3KQE9 AC010266.2-201ENST00000564741 3255 ntBASIC4.15□□□□□ -1.75
U3KQE9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 RNU6-428P-201ENST00000362942 107 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNU1-146P-201ENST00000364015 165 ntBASIC4.15□□□□□ -1.75
U3KQE9 RN7SKP69-201ENST00000365390 305 ntBASIC4.15□□□□□ -1.75
U3KQE9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNA5SP122-201ENST00000384457 108 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNU6-21P-201ENST00000384710 107 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNU6-918P-201ENST00000391219 106 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNA5SP241-201ENST00000391326 114 ntBASIC4.15□□□□□ -1.75
U3KQE9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.15□□□□□ -1.75
U3KQE9 EIF1AXP1-201ENST00000419267 435 ntBASIC4.15□□□□□ -1.75
U3KQE9 AL138785.1-201ENST00000425821 331 ntBASIC4.15□□□□□ -1.75
U3KQE9 SETP5-201ENST00000437270 562 ntBASIC4.15□□□□□ -1.75
U3KQE9 RPS15AP7-201ENST00000439294 405 ntBASIC4.15□□□□□ -1.75
U3KQE9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.15□□□□□ -1.75
U3KQE9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.15□□□□□ -1.75
U3KQE9 AC006026.2-201ENST00000457376 180 ntBASIC4.15□□□□□ -1.75
U3KQE9 RN7SL72P-201ENST00000460697 269 ntBASIC4.15□□□□□ -1.75
U3KQE9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.15□□□□□ -1.75
U3KQE9 TOMM22P6-201ENST00000465035 409 ntBASIC4.15□□□□□ -1.75
U3KQE9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.15□□□□□ -1.75
U3KQE9 AL049874.1-201ENST00000489560 388 ntBASIC4.15□□□□□ -1.75
U3KQE9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.15□□□□□ -1.75
U3KQE9 AC098976.1-201ENST00000513014 541 ntBASIC4.15□□□□□ -1.75
U3KQE9 SNORD46.2-201ENST00000516021 102 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNU6-1114P-201ENST00000516022 107 ntBASIC4.15□□□□□ -1.75
U3KQE9 RNU6-479P-201ENST00000516348 105 ntBASIC4.15□□□□□ -1.75
U3KQE9 SNORA31.18-201ENST00000517043 134 ntBASIC4.15□□□□□ -1.75
U3KQE9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.15□□□□□ -1.75
U3KQE9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.15□□□□□ -1.75
U3KQE9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.15□□□□□ -1.75
U3KQE9 AP000769.2-201ENST00000602344 396 ntBASIC4.15□□□□□ -1.75
U3KQE9 AC244107.2-201ENST00000611773 76 ntBASIC4.15□□□□□ -1.75
U3KQE9 MTND1P7-201ENST00000632801 297 ntBASIC4.15□□□□□ -1.75
U3KQE9 MIR1910-201ENST00000636955 80 ntBASIC4.15□□□□□ -1.75
U3KQE9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
U3KQE9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.15□□□□□ -1.75
U3KQE9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
U3KQE9 OR4G2P-202ENST00000641004 1759 ntBASIC4.14□□□□□ -1.75
U3KQE9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
U3KQE9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms