Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AL590139.1-201ENST00000416267 400 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RPL30P3-201ENST00000424262 333 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RNU7-197P-201ENST00000458836 62 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RPL21P13-201ENST00000488305 481 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RN7SL244P-201ENST00000493405 297 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC140172.1-201ENST00000502928 141 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-1315P-201ENST00000517187 99 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-840P-201ENST00000517275 65 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC008694.2-201ENST00000517591 306 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 BNIP3P1-201ENST00000547295 580 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC005176.2-201ENST00000596933 147 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AL161629.2-201ENST00000615347 275 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AP001340.1-201ENST00000624405 217 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 AC068647.2-201ENST00000637380 353 ntBASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC61Q9Y6R9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 IQCB2P-201ENST00000401788 1633 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNA5SP197-201ENST00000363357 119 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-32P-201ENST00000383948 107 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-13P-201ENST00000384248 107 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 Y_RNA.495-201ENST00000384435 112 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-12P-201ENST00000384604 107 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-41P-201ENST00000384741 107 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 MIR301A-201ENST00000385261 86 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AL160275.2-201ENST00000412010 394 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 NDUFB4P7-201ENST00000423198 363 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC245028.1-201ENST00000423259 256 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AL451062.2-201ENST00000427515 271 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC009220.1-201ENST00000451614 275 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AL121594.1-201ENST00000475906 575 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 SUMO2P6-201ENST00000505273 288 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC006499.6-201ENST00000511169 607 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-638P-201ENST00000516582 104 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC090877.1-201ENST00000561418 344 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 MIR4744-201ENST00000581563 82 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 AC010632.3-201ENST00000611377 369 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 NCAPGP1-201ENST00000505112 1814 ntBASIC7.13□□□□□ -1.27
CCDC61Q9Y6R9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 SAGE4P-201ENST00000442271 3381 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RNU4-80P-201ENST00000363200 141 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RNU1-74P-201ENST00000384108 171 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 MIR192-201ENST00000384915 110 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-578P-201ENST00000390980 103 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 BTF3L4P2-201ENST00000392798 346 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RPL21P126-201ENST00000470049 478 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AP000870.1-201ENST00000472927 406 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RN7SKP164-201ENST00000516138 266 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 RNU2-56P-201ENST00000516826 190 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AC005476.1-201ENST00000554427 397 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AL157871.3-201ENST00000557231 293 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AC008121.1-201ENST00000603244 268 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC61Q9Y6R9 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 AC009812.4-201ENST00000569134 1805 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-103P-201ENST00000363686 107 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-961P-201ENST00000363893 105 ntBASIC7.11□□□□□ -1.27
CCDC61Q9Y6R9 RNU6-213P-201ENST00000384051 104 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms