Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AL079342.1-201ENST00000401460 267 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 LAP3P1-201ENST00000403648 294 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 COX6CP10-201ENST00000416832 224 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC007389.2-201ENST00000434630 306 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AL136097.1-201ENST00000456945 913 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC023141.9-201ENST00000458734 412 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 U8.22-201ENST00000459141 133 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 TOMM22P6-201ENST00000465035 409 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 HSPE1P6-201ENST00000479457 291 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 RN7SL273P-201ENST00000481561 299 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC022404.1-201ENST00000555320 273 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC022968.1-201ENST00000567372 442 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 AP000787.2-201ENST00000604432 568 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 BRDTP1-201ENST00000605735 677 ntBASIC5.03□□□□□ -1.6
GPC6Q9Y625 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 MIR412-201ENST00000362142 91 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNU6-858P-201ENST00000362436 107 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNA5SP52-201ENST00000362448 134 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNU6-428P-201ENST00000362942 107 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNU6-102P-201ENST00000384485 104 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 MIR10A-201ENST00000385043 110 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 Y_RNA.581-201ENST00000391017 97 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNU4-34P-201ENST00000410431 124 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 CYCSP6-201ENST00000434498 302 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 TMSB4XP3-201ENST00000445144 114 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC079354.2-201ENST00000453523 154 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 RNU6-1278P-201ENST00000516130 107 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC027369.5-201ENST00000533838 755 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 RN7SL356P-201ENST00000582228 248 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 SNORD84-203ENST00000584275 78 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 AL161798.1-201ENST00000604630 131 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 AL353748.2-201ENST00000622148 471 ntBASIC5.02□□□□□ -1.61
GPC6Q9Y625 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GPC6Q9Y625 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
GPC6Q9Y625 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 MTCYBP2-201ENST00000407745 171 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 AL117339.3-201ENST00000418733 162 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 RNU7-175P-201ENST00000515915 61 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 RNU6-861P-201ENST00000516745 106 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GPC6Q9Y625 CBX3P4-201ENST00000538909 354 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 AL121603.1-201ENST00000553815 142 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 MIR1273E-201ENST00000581165 102 ntBASIC5.01□□□□□ -1.61
GPC6Q9Y625 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.01□□□□□ -1.61
GPC6Q9Y625 AC109583.2-201ENST00000617367 129 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms