Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNA5SP104-201ENST00000410989 118 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SKP53-201ENST00000411337 315 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 GPM6BP2-201ENST00000432046 144 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 HSPD1P21-201ENST00000436541 245 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL353748.1-201ENST00000440753 474 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 GPM6BP1-201ENST00000446387 144 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SL604P-201ENST00000492589 296 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 MTCO2P30-201ENST00000503662 364 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RNA5SP49-201ENST00000516450 115 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 PSMA3P-201ENST00000555485 635 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR4429-201ENST00000580105 73 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 U2.17-201ENST00000611454 95 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-512P-201ENST00000364438 103 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU4-20P-201ENST00000365601 151 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR554-201ENST00000384874 96 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR23A-201ENST00000385245 73 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC108032.1-201ENST00000416706 207 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RPL35AP12-201ENST00000425362 338 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC007919.1-201ENST00000429380 217 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RPL7P12-201ENST00000446719 750 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 HMGN2P16-201ENST00000456802 261 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC004801.2-202ENST00000463559 283 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC008628.2-201ENST00000502605 298 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR1273C-201ENST00000578669 77 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL161729.3-201ENST00000603533 673 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AP002360.3-201ENST00000607673 710 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL110115.1-201ENST00000614396 364 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AL512643.1-201ENST00000635735 524 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC121333.1-201ENST00000567488 2709 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 AC002546.1-201ENST00000588041 2504 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 CUL1P1-201ENST00000509510 2425 ntBASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA9Q9Y5G4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR372-201ENST00000362225 67 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 RNA5SP283-201ENST00000365604 119 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AL139397.2-201ENST00000404529 772 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 NDUFB4P6-201ENST00000436819 366 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SL132P-201ENST00000478131 296 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC012181.1-201ENST00000479895 423 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 SNORA67.7-201ENST00000516664 135 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC022690.1-201ENST00000526681 550 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC023050.3-201ENST00000541142 333 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SL600P-201ENST00000581811 299 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms