Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL139276.1-201ENST00000311910 1001 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU1-18P-201ENST00000363062 164 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP130-201ENST00000364431 114 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.255-201ENST00000364581 97 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-996P-201ENST00000365438 107 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 SNORD6-201ENST00000365444 73 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 MIR325-201ENST00000385260 98 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 MIR670-201ENST00000390142 98 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RPL21P17-201ENST00000397467 475 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL591416.1-201ENST00000404015 867 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 MIR1251-201ENST00000408552 70 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU2-29P-201ENST00000410423 189 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CYCSP19-201ENST00000411715 316 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC092809.3-201ENST00000415453 231 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC108032.1-201ENST00000416706 207 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RPL7P2-201ENST00000427639 268 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 ELOCP14-201ENST00000428070 331 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL512844.2-201ENST00000433990 593 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 ELOCP7-201ENST00000439968 331 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC016691.1-201ENST00000441321 413 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC006011.1-201ENST00000442758 349 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 VN1R34P-201ENST00000447387 883 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 FGF7P6-202ENST00000451282 293 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 SSXP4-201ENST00000451349 245 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RPS29P15-201ENST00000458329 171 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC078785.3-201ENST00000476607 425 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RPL29P14-201ENST00000495837 428 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 UBE2CP3-201ENST00000502715 450 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RBBP4P6-201ENST00000508098 202 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC026726.1-201ENST00000512859 601 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-123P-201ENST00000516163 102 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.704-201ENST00000516851 102 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-835P-201ENST00000516974 104 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNA5SP503-201ENST00000517047 117 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RNU1-45P-201ENST00000517191 141 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 NARSP2-201ENST00000518524 679 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 RANP3-201ENST00000530970 276 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL158032.1-201ENST00000605401 106 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 MIR6875-201ENST00000617506 72 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AL160394.1-201ENST00000624765 724 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC244205.2-202ENST00000635781 342 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC022336.2-201ENST00000568966 2538 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 AC004972.1-201ENST00000623934 2209 ntBASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM4Q9Y4Z0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.381-201ENST00000365666 102 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 BTF3P7-201ENST00000407097 488 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AC080125.1-201ENST00000414888 684 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AL358472.1-201ENST00000431295 329 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AL596276.1-201ENST00000434465 418 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 ELOCP23-201ENST00000452014 332 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 FABP5P15-201ENST00000453566 214 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 ANP32BP2-201ENST00000454525 545 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AC146944.2-203ENST00000502493 354 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 AC139495.1-202ENST00000513164 354 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-718P-201ENST00000516166 105 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-1281P-201ENST00000516223 105 ntBASIC3.18□□□□□ -1.9
LSM4Q9Y4Z0 RNU6-914P-201ENST00000516749 109 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms