Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 ZNF299P-201ENST00000406845 1804 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NOD1Q9Y239 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NOD1Q9Y239 Y_RNA.33-201ENST00000362591 102 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NOD1Q9Y239 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 MIR521-1-201ENST00000384902 87 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 RNU6-1093P-201ENST00000391194 107 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AL354868.1-201ENST00000417077 482 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC007098.1-201ENST00000420122 367 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC079780.1-201ENST00000428259 207 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC004938.1-201ENST00000438468 308 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AL049874.1-201ENST00000489560 388 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 HMGB1P35-201ENST00000503360 598 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 Y_RNA.673-201ENST00000516306 88 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC136777.2-201ENST00000522979 358 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 ATP5J2P6-201ENST00000565203 266 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 MIR4277-201ENST00000578298 84 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC099669.2-201ENST00000616549 437 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 SDR42E1P4-201ENST00000620894 481 ntBASIC5.42□□□□□ -1.54
NOD1Q9Y239 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NOD1Q9Y239 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.42□□□□□ -1.54
NOD1Q9Y239 AC140134.1-201ENST00000511830 3544 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-37P-201ENST00000362692 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-1167P-201ENST00000363227 94 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-11P-201ENST00000364234 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-7-201ENST00000364784 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-8-201ENST00000365467 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-25P-201ENST00000383873 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-1-201ENST00000383898 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-48P-201ENST00000384161 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-36P-201ENST00000384172 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-4P-201ENST00000384205 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-5P-201ENST00000384238 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 Y_RNA.471-201ENST00000384312 102 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-3P-201ENST00000384314 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-16P-201ENST00000384385 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-15P-201ENST00000384534 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-2-201ENST00000384627 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-29P-201ENST00000384637 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-9-201ENST00000384776 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-33P-201ENST00000384793 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU11-201ENST00000387069 134 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 LAP3P1-201ENST00000403648 294 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 TBCAP2-201ENST00000416175 326 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 MTCO1P39-201ENST00000426148 480 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AL132765.1-201ENST00000434165 553 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RPS5P7-201ENST00000456664 608 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RN7SL441P-201ENST00000492388 296 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU4-60P-201ENST00000517239 135 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AP003733.2-201ENST00000529409 171 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 AMZ2P1-203ENST00000565833 850 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RN7SL690P-201ENST00000582087 240 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AL360012.1-201ENST00000602813 131 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNU6-6P-201ENST00000606623 107 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 AC063976.2-201ENST00000425667 3556 ntBASIC5.41□□□□□ -1.54
NOD1Q9Y239 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.41□□□□□ -1.54
NOD1Q9Y239 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NOD1Q9Y239 SDAD1P2-201ENST00000441308 2028 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NOD1Q9Y239 SNORA69.1-201ENST00000390904 137 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 RNU6-700P-201ENST00000391043 107 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 RNA5SP241-201ENST00000391326 114 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 RNU6-1025P-201ENST00000410629 104 ntBASIC5.4□□□□□ -1.54
NOD1Q9Y239 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.4□□□□□ -1.54
NOD1Q9Y239 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms