Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 SNRPEP4-201ENST00000435815 279 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 RPL35AP22-201ENST00000436855 335 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC108059.3-201ENST00000456388 214 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AL359385.1-201ENST00000456509 365 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 MTCO2P29-201ENST00000465212 189 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC114967.1-201ENST00000504890 259 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC010587.1-201ENST00000505809 469 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 APOOP4-201ENST00000513530 597 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 MTND4LP26-201ENST00000518144 282 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC007684.1-201ENST00000609671 477 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 AC002076.2-201ENST00000617362 122 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 OR5H6-203ENST00000642105 978 ntBASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK11AQ9UQ88 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RNU5A-8P-201ENST00000364102 114 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RNY1P12-201ENST00000364251 105 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 Y_RNA.548-201ENST00000384656 105 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 MIR181A1-201ENST00000385026 110 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RNU6-278P-201ENST00000390945 109 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RNU2-62P-201ENST00000410868 191 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL353678.1-201ENST00000422735 741 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RPL27AP8-201ENST00000424277 446 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 FCF1P1-201ENST00000432690 571 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC093156.1-201ENST00000440382 670 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 PSPHP1-201ENST00000450062 261 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 MTND1P12-201ENST00000455231 147 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC109925.1-201ENST00000478069 331 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC004924.1-201ENST00000480160 781 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 HMGB1P29-201ENST00000505659 499 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 RNU6-314P-201ENST00000516574 104 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC022690.1-201ENST00000526681 550 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC026333.2-201ENST00000542164 106 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 EIF4BP1-201ENST00000554881 351 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC067852.3-201ENST00000589177 561 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL158211.4-201ENST00000606988 584 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC007038.2-201ENST00000608095 740 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AP002826.1-201ENST00000608835 315 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL138713.1-201ENST00000624026 2130 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AC124864.2-201ENST00000624736 186 ntBASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.25□□□□□ -1.57
CDK11AQ9UQ88 AL035425.3-201ENST00000564206 4996 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 RNU6-516P-201ENST00000411381 104 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 MTND3P17-201ENST00000416968 344 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 SSXP9-201ENST00000417503 292 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 MTCYBP5-201ENST00000423752 1135 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 UBE2D3P2-201ENST00000424409 445 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AL358934.1-201ENST00000432346 324 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 TIMM9P1-201ENST00000436122 256 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 VN1R104P-201ENST00000505115 1009 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 RN7SKP83-201ENST00000516512 178 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC090136.1-201ENST00000520009 240 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC107934.1-201ENST00000522215 217 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AP006245.1-201ENST00000522549 120 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AL845331.3-202ENST00000562856 261 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 MIR5047-201ENST00000579212 100 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC106900.2-201ENST00000604994 317 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 MIR98-201ENST00000606724 119 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC126118.1-201ENST00000607744 628 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AL162274.2-201ENST00000614406 332 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 AC068831.7-201ENST00000616954 363 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 CR381653.2-201ENST00000624041 768 ntBASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CDK11AQ9UQ88 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 MIR19A-201ENST00000384878 82 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 AC019097.1-201ENST00000424783 735 ntBASIC5.23□□□□□ -1.57
CDK11AQ9UQ88 TIMM9P3-201ENST00000428659 274 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms