Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AC010653.1-201ENST00000571108 881 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 MIR5004-201ENST00000579078 107 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 COX6CP3-201ENST00000580869 223 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 KC877982.1-201ENST00000602313 470 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AC008277.2-201ENST00000605196 797 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AC063943.3-201ENST00000615562 356 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AC012150.2-201ENST00000621300 544 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AP003355.3-201ENST00000623465 114 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.07□□□□□ -1.76
SCAF8Q9UPN6 TAB3P1-202ENST00000452645 1634 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC138915.3-201ENST00000562908 1389 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RNU6-1103P-201ENST00000384150 107 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.548-201ENST00000384656 105 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RNU6-278P-201ENST00000390945 109 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC004866.2-201ENST00000438285 481 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC006028.1-201ENST00000438379 402 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC093156.1-201ENST00000440382 670 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 UBE2V1P7-201ENST00000446395 340 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AL136097.1-201ENST00000456945 913 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RPL23AP62-201ENST00000463396 453 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC010285.1-201ENST00000470580 392 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RBM43P1-201ENST00000476891 1081 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC105914.1-201ENST00000511798 226 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RNU6-507P-201ENST00000516045 100 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 SNORA20.3-201ENST00000516880 132 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC005730.3-201ENST00000583067 366 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AP001429.1-201ENST00000602568 530 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC008536.2-201ENST00000607284 349 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AL355472.4-201ENST00000610233 626 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 AL360181.4-201ENST00000621752 134 ntBASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAF8Q9UPN6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 MAPK10-253ENST00000641010 4072 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.1-201ENST00000352915 104 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 RNU6-173P-201ENST00000364215 104 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.409-201ENST00000383990 98 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.573-201ENST00000384763 105 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 RNU6-882P-201ENST00000391025 103 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 RNU2-62P-201ENST00000410868 191 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 JKAMPP1-201ENST00000413804 919 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 FCF1P1-201ENST00000432690 571 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 C1DP4-201ENST00000455429 424 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 HMGN2P7-201ENST00000456186 273 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC023598.1-201ENST00000472521 361 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC021146.1-201ENST00000511202 716 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC010493.1-201ENST00000513479 292 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC026801.2-201ENST00000515352 425 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.672-201ENST00000516289 104 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.704-201ENST00000516851 102 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AP003181.2-201ENST00000528941 181 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC109635.3-201ENST00000529536 185 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC005476.1-201ENST00000554427 397 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AL157687.1-201ENST00000554853 619 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 OR4K8P-201ENST00000578842 1048 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC245014.2-201ENST00000603689 287 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AC246785.4-201ENST00000605374 287 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AL353748.2-201ENST00000622148 471 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AL159972.1-201ENST00000625150 448 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 AL137790.1-201ENST00000634283 177 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 LRRC77P-213ENST00000637727 880 ntBASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 DDX10P1-201ENST00000448545 1933 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms