Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 OR56A5-201ENST00000340110 738 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.64-201ENST00000362845 102 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RNY3P11-201ENST00000364153 102 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 SNORA20.1-201ENST00000364790 130 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.477-201ENST00000384352 108 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RNU6-146P-201ENST00000384602 108 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 SNORD73A-201ENST00000386062 65 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RPL21P91-201ENST00000429231 479 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 ELOCP18-201ENST00000434209 337 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 DAP3P1-201ENST00000441522 278 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AL360271.2-201ENST00000447710 161 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 MTND4LP30-201ENST00000454092 297 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC133473.1-201ENST00000455173 299 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 PCMTD1P1-201ENST00000455560 355 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AL445433.1-201ENST00000457507 257 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RPL37P6-201ENST00000460682 294 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RPL37P6-202ENST00000464216 403 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC025465.3-201ENST00000510570 311 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC087369.1-201ENST00000520775 996 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 CBX3P8-201ENST00000532412 525 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC090517.1-201ENST00000569307 266 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AL450472.3-201ENST00000615578 367 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AC091953.3-201ENST00000623220 236 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
AP4E1Q9UPM8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RN7SKP115-201ENST00000363177 317 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RNU6-1155P-201ENST00000363554 107 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.551-201ENST00000384661 102 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 PPP1R11P2-201ENST00000423543 382 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 Z74021.1-201ENST00000423610 407 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC090774.1-201ENST00000435925 246 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RPS3AP12-201ENST00000443616 753 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 MTCO3P8-201ENST00000453691 755 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RNU6-138P-201ENST00000515952 107 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RN7SKP258-201ENST00000517151 304 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC069113.1-201ENST00000517763 267 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AP003385.6-201ENST00000531603 374 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC006600.1-201ENST00000572529 153 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 MIR4716-201ENST00000579628 84 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 AL160281.1-201ENST00000605307 311 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 RNU6-85P-201ENST00000605989 107 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 MIR15A-201ENST00000607334 83 ntBASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP4E1Q9UPM8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 RNU6-288P-201ENST00000363690 104 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 RNU6-1093P-201ENST00000391194 107 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 Z98745.1-201ENST00000402553 494 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AL137014.1-201ENST00000420490 1226 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 RPS27AP13-201ENST00000498403 237 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 GZMAP1-201ENST00000503054 631 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 LRRC37A5P-203ENST00000580181 585 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC012669.1-201ENST00000603209 283 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC024940.4-201ENST00000605507 246 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AL049539.1-201ENST00000611964 459 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms