Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC233279.1-201ENST00000455300 423 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 RBM43P1-201ENST00000476891 1081 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC109445.1-201ENST00000512356 383 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 MIR3616-201ENST00000584070 92 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC060766.3-201ENST00000591442 263 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC002545.1-201ENST00000592511 181 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC090186.1-201ENST00000605991 572 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 AC008498.1-201ENST00000613012 531 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
KLHL28Q9NXS3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 RNU6-223P-201ENST00000362830 107 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 RNU6-289P-201ENST00000364093 107 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 RN7SKP226-201ENST00000364912 300 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 RNU6-301P-201ENST00000384277 107 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 MIR888-201ENST00000401186 77 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 USP9YP10-201ENST00000454868 628 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC126389.1-201ENST00000477436 290 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC090525.1-201ENST00000479116 478 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC135721.1-201ENST00000497954 479 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC109329.2-201ENST00000519658 482 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC100870.1-201ENST00000522035 505 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 YWHAZP1-201ENST00000556286 722 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 HMGB1P24-202ENST00000615653 685 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC116618.1-201ENST00000634617 774 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 AC099063.3-201ENST00000642066 185 ntBASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KLHL28Q9NXS3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 RNU1-112P-201ENST00000364401 164 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 RNA5SP126-201ENST00000365092 109 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 RNU6-432P-201ENST00000384196 109 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MIR9-1-201ENST00000385198 89 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 RNA5SP210-201ENST00000391034 120 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AL360182.1-201ENST00000397433 468 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AL136310.1-201ENST00000404926 654 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MTATP6P20-201ENST00000414147 562 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AL139413.1-201ENST00000421309 217 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 OR10R1P-201ENST00000441524 1141 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 RPL36AP51-201ENST00000487216 318 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 TBCAP3-201ENST00000512475 312 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 TPMTP1-201ENST00000592307 737 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MTND4LP5-201ENST00000605152 292 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC006270.3-201ENST00000605967 1036 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 AC245297.2-201ENST00000610119 565 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KLHL28Q9NXS3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms