Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 BEND7P1-201ENST00000422058 457 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC007283.2-201ENST00000424739 197 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 HMGB1P22-201ENST00000505315 124 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 MTND2P33-201ENST00000506452 1031 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 RN7SKP298-201ENST00000515950 94 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 SETP2-201ENST00000553886 926 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC078899.3-201ENST00000599065 212 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC121334.2-201ENST00000605387 271 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC013562.2-201ENST00000611632 603 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC091834.1-201ENST00000614543 472 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC068831.7-201ENST00000616954 363 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AC015967.1-201ENST00000619893 476 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL035425.3-201ENST00000564206 4996 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RNU5E-1-201ENST00000362477 120 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RPS15AP12-201ENST00000419498 388 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC010975.2-201ENST00000427781 588 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL358934.1-201ENST00000432346 324 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC009961.2-201ENST00000435771 251 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC104850.1-201ENST00000435940 476 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC073614.1-201ENST00000438690 650 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RPL21P23-201ENST00000446654 460 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC104619.4-201ENST00000510773 249 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RNU6-430P-201ENST00000517078 107 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 TRMT10BP1-201ENST00000519377 943 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 CCNG2P1-201ENST00000549521 1000 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC034105.3-201ENST00000565294 442 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 ZNF415P1-201ENST00000582279 1166 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL022099.1-201ENST00000604551 712 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RNU6-87P-201ENST00000607561 108 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC007038.2-201ENST00000608095 740 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC122108.2-201ENST00000611946 526 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL020991.1-201ENST00000612314 373 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC013476.2-201ENST00000614456 459 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL450472.3-201ENST00000615578 367 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC015540.1-201ENST00000615828 501 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC244100.1-202ENST00000621554 382 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AC243312.2-201ENST00000623340 601 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 AL136313.1-201ENST00000624804 202 ntBASIC2.92□□□□□ -1.94
NDE1Q9NXR1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
NDE1Q9NXR1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 SNORD15B-201ENST00000384714 146 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 AL591034.1-201ENST00000407447 340 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 RNU2-43P-201ENST00000410306 190 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 RNU6-516P-201ENST00000411381 104 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 AL031779.1-201ENST00000415663 330 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 MTCO3P12-201ENST00000416718 547 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.91□□□□□ -1.94
NDE1Q9NXR1 RPL31P35-201ENST00000431058 377 ntBASIC2.91□□□□□ -1.94
NDE1Q9NXR1 RPL23AP83-201ENST00000434984 473 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms