Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 CCDC34P1-201ENST00000507441 517 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC010486.1-201ENST00000511793 424 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC023050.3-201ENST00000541142 333 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 MIR4443-201ENST00000585052 53 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC024940.4-201ENST00000605507 246 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 FAM25E-202ENST00000608562 189 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 MIR6780A-201ENST00000615089 68 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC022306.2-201ENST00000617563 647 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC090617.10-201ENST00000624308 134 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 HSPA8P4-201ENST00000511877 1920 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 MAPK10-373ENST00000641983 6772 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 RNU6-1127P-201ENST00000384580 107 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL139039.1-201ENST00000401900 692 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL162578.1-201ENST00000406202 378 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 Y_RNA.615-201ENST00000410769 117 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC007919.1-201ENST00000429380 217 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL592045.1-201ENST00000429867 352 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC011998.1-201ENST00000433403 117 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL772161.1-201ENST00000439130 476 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 RPS24P13-201ENST00000442520 397 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 PHBP16-201ENST00000446318 950 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL671855.1-201ENST00000446875 1203 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AP000852.1-201ENST00000472460 573 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 HMGN1P12-201ENST00000499125 195 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 RNA5SP519-201ENST00000516480 119 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL118558.2-201ENST00000556294 238 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 MIR5047-201ENST00000579212 100 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC011712.1-201ENST00000588959 234 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC093227.2-201ENST00000589357 285 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC009570.1-201ENST00000609599 745 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AL110115.1-201ENST00000614396 364 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 AC092628.2-201ENST00000622492 339 ntBASIC4.07□□□□□ -1.76
MKS1Q9NXB0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MKS1Q9NXB0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC007785.2-201ENST00000598627 1916 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 CBX3P1-201ENST00000325243 554 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNU6-522P-201ENST00000364497 107 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AL590704.1-201ENST00000402856 794 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNU4-26P-201ENST00000410270 107 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC009161.1-201ENST00000417306 376 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 USP9YP8-201ENST00000441913 500 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 PIGFP3-201ENST00000441918 722 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RPS15AP27-201ENST00000449183 343 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RPL35AP28-201ENST00000459730 331 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC012181.1-201ENST00000479895 423 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 LRRC34P2-201ENST00000514850 553 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNU6-1038P-201ENST00000516516 104 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNA5SP291-201ENST00000517222 105 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC022655.2-201ENST00000577280 318 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 MIR4270-201ENST00000581799 70 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC012417.1-201ENST00000582307 1039 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 UBE2V2P2-201ENST00000587677 504 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AL592436.1-201ENST00000605135 558 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 Mico1.1-201ENST00000611698 204 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC091953.3-201ENST00000623220 236 ntBASIC4.06□□□□□ -1.76
MKS1Q9NXB0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MKS1Q9NXB0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms