Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC084024.2-201ENST00000503480 791 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC113420.1-201ENST00000507903 571 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 SCARNA17.1-201ENST00000516211 143 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 SCARNA17.2-201ENST00000516334 143 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 SCARNA11.3-201ENST00000517276 130 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 NIFKP8-201ENST00000560500 874 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 MIR4448-201ENST00000584360 86 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC133794.1-201ENST00000602731 914 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC136601.2-201ENST00000604356 474 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL031176.1-201ENST00000604554 466 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CISHQ9NSE2 SCARNA17.4-201ENST00000614296 143 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL449363.1-201ENST00000617815 186 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC090772.4-201ENST00000623599 362 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.82□□□□□ -2.12
CISHQ9NSE2 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
CISHQ9NSE2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CISHQ9NSE2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CISHQ9NSE2 ZNF849P-201ENST00000594711 1566 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 Z98749.2-208ENST00000381646 500 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 MIR135A2-201ENST00000384854 100 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 RNU6-220P-201ENST00000390919 107 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AL627390.1-201ENST00000396055 340 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AL035405.1-201ENST00000400795 710 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 Z85995.1-201ENST00000415547 335 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 SPA17P1-201ENST00000416656 452 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 CDC42P1-201ENST00000456658 548 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC090515.1-201ENST00000465295 476 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 SUMO2P6-201ENST00000505273 288 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC022483.1-201ENST00000514020 567 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC091834.1-201ENST00000614543 472 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC106730.3-201ENST00000624568 641 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC002543.1-201ENST00000299783 1954 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 CCT4P2-201ENST00000233836 1548 ntBASIC1.81□□□□□ -2.12
CISHQ9NSE2 AC080128.1-201ENST00000474389 1917 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 RNU6-76P-201ENST00000384060 104 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC016769.3-201ENST00000396562 315 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 RNU6-1328P-201ENST00000410938 106 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 RPS7P9-201ENST00000414704 586 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AL512844.2-201ENST00000433990 593 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 GPM6BP3-201ENST00000442797 145 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 RNFT1P2-201ENST00000443064 757 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 GTF2IP12-201ENST00000456547 356 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC079203.1-201ENST00000487972 404 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC118282.2-201ENST00000508739 374 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC109471.1-201ENST00000511631 612 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 SNORA48.10-201ENST00000516965 160 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC011611.5-201ENST00000552477 578 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.8□□□□□ -2.12
CISHQ9NSE2 AL022067.1-201ENST00000602426 454 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
CISHQ9NSE2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CISHQ9NSE2 RNU6-582P-201ENST00000362989 107 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 MIR325-201ENST00000385260 98 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 SNORD65C-201ENST00000390962 71 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 SNORA46.1-201ENST00000391069 153 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 TRIM60P13-201ENST00000432350 1283 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 RPL26P6-201ENST00000440913 438 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 BMI1P1-201ENST00000445879 941 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 KLF3P2-201ENST00000465138 268 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.79□□□□□ -2.12
CISHQ9NSE2 RNU7-193P-201ENST00000516723 65 ntBASIC1.79□□□□□ -2.12
CISHQ9NSE2 AP005902.1-201ENST00000521358 186 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms