Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RPL23AP30-201ENST00000432419 501 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RPS20P5-201ENST00000434808 360 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 NEFMP1-201ENST00000443423 1006 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AL357552.1-201ENST00000445254 415 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 SNORA67.7-201ENST00000516664 135 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RNA5SP291-201ENST00000517222 105 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RANP9-201ENST00000519957 271 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 SUB1P2-201ENST00000556401 297 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 TRAV28-201ENST00000557548 323 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 NCAPGP2-201ENST00000557911 754 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC098848.2-201ENST00000588023 330 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC034102.8-201ENST00000615146 484 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC007998.5-201ENST00000622938 237 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-946P-201ENST00000383878 107 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-641P-201ENST00000384006 107 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-14P-201ENST00000384630 106 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AP000907.1-201ENST00000428428 510 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 HMGB1P27-201ENST00000431429 603 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC092573.2-201ENST00000434546 243 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AL451074.3-201ENST00000437709 472 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 Z82210.1-201ENST00000440037 231 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 MTND1P1-201ENST00000445453 368 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC022364.2-201ENST00000457963 554 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC117522.1-201ENST00000509821 380 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 BNIP3P22-201ENST00000593399 556 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC007363.1-201ENST00000604736 620 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC027309.3-201ENST00000623419 351 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC009161.2-201ENST00000624626 138 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 MTND1P37-201ENST00000636562 264 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC099654.12-201ENST00000639868 649 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AC005183.1-201ENST00000603687 1979 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
SLC6A13Q9NSD5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 Y_RNA.367-201ENST00000365544 101 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-74P-201ENST00000384235 107 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 MIR670-201ENST00000390142 98 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 RNU4-55P-201ENST00000410731 137 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 RPL9P6-201ENST00000492764 598 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC079382.1-201ENST00000493346 557 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC026427.2-201ENST00000506228 536 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 FAM92A1P1-201ENST00000528023 890 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC034105.3-201ENST00000565294 442 ntBASIC3.29□□□□□ -1.88
SLC6A13Q9NSD5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms