Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RNU6-1256P-201ENST00000516539 103 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 HMGN1P28-201ENST00000521340 364 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC023538.1-201ENST00000534576 736 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 LRRC34P1-201ENST00000542742 915 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC124947.2-202ENST00000552735 133 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 HMGB1P14-201ENST00000557424 591 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC005951.2-201ENST00000576282 495 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 MIR3609-201ENST00000582661 80 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 MIR4999-201ENST00000585029 91 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC021171.1-201ENST00000603137 706 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC008147.4-201ENST00000617570 1204 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 TPTE2P4-201ENST00000258589 1605 ntBASIC2.9□□□□□ -1.94
HPS4Q9NQG7 RNU6-1214P-201ENST00000363650 109 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL590084.2-201ENST00000401481 382 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 SNORD88.1-201ENST00000408684 91 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL359704.1-201ENST00000411586 781 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL590383.1-201ENST00000428602 75 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 RPL35AP22-201ENST00000436855 335 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 FAM103A2P-201ENST00000444122 354 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 SNRPGP6-201ENST00000451124 220 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL109741.2-201ENST00000455561 343 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 OR6K1P-201ENST00000456766 971 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 RPL21P41-201ENST00000459863 264 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 MTND2P14-201ENST00000482139 351 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 SEM1P1-201ENST00000506694 209 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 MIR544B-201ENST00000582372 78 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL139344.1-201ENST00000605228 195 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AC116312.1-201ENST00000606841 314 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AP002791.1-201ENST00000623291 381 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 LRRC77P-213ENST00000637727 880 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 AL138713.1-201ENST00000624026 2130 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 MTND5P33-201ENST00000571250 1450 ntBASIC2.9□□□□□ -1.95
HPS4Q9NQG7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL391994.1-201ENST00000254724 282 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 RNU1-39P-201ENST00000383897 165 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 RNU6-432P-201ENST00000384196 109 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 MIR34A-201ENST00000385130 110 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 MIR325-201ENST00000385260 98 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL138827.1-201ENST00000402666 306 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL139413.1-201ENST00000421309 217 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 MTND1P20-201ENST00000430341 950 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL354941.1-201ENST00000438600 464 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 TPT1P14-201ENST00000448018 505 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC010099.1-201ENST00000455434 375 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 RN7SL499P-201ENST00000481141 276 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC098799.2-201ENST00000509466 868 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC114781.4-201ENST00000513707 639 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 RNU4-29P-201ENST00000515943 174 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 RNU6-840P-201ENST00000517275 65 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL355836.1-201ENST00000555951 870 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 BNIP3P23-201ENST00000599655 511 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC013412.1-201ENST00000610687 192 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL359198.2-201ENST00000611836 194 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC093838.1-201ENST00000613014 469 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 TUG1_2.1-201ENST00000614234 87 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC013476.2-201ENST00000614456 459 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AC007490.1-201ENST00000624321 703 ntBASIC2.89□□□□□ -1.95
HPS4Q9NQG7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms