Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 SNRPEP9-201ENST00000436794 238 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC021382.1-201ENST00000483523 359 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL160314.1-201ENST00000490836 438 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 CAB39P1-201ENST00000502277 460 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC096571.1-202ENST00000506634 735 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC008628.1-201ENST00000508663 265 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 SCARNA3-201ENST00000517097 143 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 MTCO2P15-201ENST00000532655 656 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC106782.4-201ENST00000568264 210 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC024619.4-201ENST00000580924 316 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL353997.4-201ENST00000586196 166 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC005261.5-201ENST00000596280 355 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 VN1R92P-201ENST00000598511 928 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL391813.1-201ENST00000603098 260 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC012468.1-201ENST00000604888 430 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC004805.2-201ENST00000605382 482 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 TUG1_2.1-201ENST00000614234 87 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 SDR42E1P2-201ENST00000614861 481 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 AC092608.2-201ENST00000624427 218 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 U2.21-201ENST00000637295 81 ntBASIC2.03□□□□□ -2.08
VCX3AQ9NNX9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VCX3AQ9NNX9 ELF2P3-201ENST00000445099 1506 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 RNU6-754P-201ENST00000391166 107 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 TXNP7-201ENST00000406296 293 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 RPL30P4-201ENST00000429309 333 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 MTND5P14-201ENST00000441481 1267 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 MTND1P31-201ENST00000449206 961 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 TRBV1-201ENST00000476502 284 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 RNA5SP290-201ENST00000517133 127 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 COX6CP8-201ENST00000522620 226 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC007151.1-201ENST00000572774 483 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 MIR3122-201ENST00000577243 73 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 RPP40P2-201ENST00000603596 712 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC239868.4-201ENST00000608318 671 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC107294.1-201ENST00000609524 467 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC107075.1-201ENST00000613695 314 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC009268.2-201ENST00000621925 457 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC007490.1-201ENST00000624321 703 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AC025048.6-202ENST00000627667 438 ntBASIC2.02□□□□□ -2.09
VCX3AQ9NNX9 AL354685.2-201ENST00000448218 1447 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL161781.1-201ENST00000354277 403 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 RNU6-778P-201ENST00000363269 103 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL360182.1-201ENST00000397433 468 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 CCNG1P1-201ENST00000406783 885 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC005005.2-201ENST00000420779 380 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 RPL23AP83-201ENST00000434984 473 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 CECR9-201ENST00000453421 199 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 HMGB1P36-201ENST00000487709 576 ntBASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.01□□□□□ -2.09
VCX3AQ9NNX9 AC079600.2-201ENST00000550076 130 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms