Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC021146.1-201ENST00000511202 716 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AC026801.2-201ENST00000515352 425 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 RN7SKP24-201ENST00000515888 284 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 SNORA70.14-201ENST00000516205 110 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 RN7SKP219-201ENST00000516825 296 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 MIR2116-201ENST00000517221 80 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 MIR5690-201ENST00000583739 73 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD248Q9HCU0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
CD248Q9HCU0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CD248Q9HCU0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD248Q9HCU0 MTND5P19-201ENST00000424872 1794 ntBASIC4.4□□□□□ -1.7
CD248Q9HCU0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD248Q9HCU0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD248Q9HCU0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CD248Q9HCU0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 MIR372-201ENST00000362225 67 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 U3.12-201ENST00000364498 214 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 MIR454-201ENST00000390180 115 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC016769.3-201ENST00000396562 315 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AL157831.1-201ENST00000426134 473 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 HMGB3P11-201ENST00000440127 604 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC093156.1-201ENST00000440382 670 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 PRPS1P1-201ENST00000445305 876 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 ANP32BP2-201ENST00000454525 545 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 ELOCP24-201ENST00000456370 334 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 RNU7-66P-201ENST00000459469 62 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 RPL23AP11-201ENST00000475260 469 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AF213884.1-201ENST00000488102 463 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 RNU6-764P-201ENST00000516396 105 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 RNU6-1088P-201ENST00000516850 104 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 RANP9-201ENST00000519957 271 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 OR8R1P-201ENST00000543943 764 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 RPL21P12-201ENST00000559810 515 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC068790.3-201ENST00000602988 553 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AL354984.3-201ENST00000604803 325 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AL592436.1-201ENST00000605135 558 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 HSPE1P14-201ENST00000605812 302 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 HMGB1P24-202ENST00000615653 685 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 AL445363.3-201ENST00000623080 671 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC091905.2-201ENST00000623143 306 ntBASIC4.4□□□□□ -1.71
CD248Q9HCU0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD248Q9HCU0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.4□□□□□ -1.71
CD248Q9HCU0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC010300.1-201ENST00000600671 5134 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU6-28P-201ENST00000362378 107 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU6-552P-201ENST00000362869 119 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU6-1188P-201ENST00000363795 107 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 Y_RNA.176-201ENST00000363815 109 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 SNORA51.6-201ENST00000384151 125 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 Y_RNA.557-201ENST00000384680 107 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 RNU6-903P-201ENST00000391270 109 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD248Q9HCU0 RPL31P12-201ENST00000422587 358 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 AL160004.2-201ENST00000432935 350 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AL035666.1-201ENST00000446195 348 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 SUMO1P2-201ENST00000452524 304 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.39□□□□□ -1.71
CD248Q9HCU0 RPS29P15-201ENST00000458329 171 ntBASIC4.39□□□□□ -1.71
CD248Q9HCU0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms