Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL353729.1-201ENST00000425044 720 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AL356867.1-201ENST00000429623 299 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 OSTCP8-201ENST00000445117 448 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC092155.2-201ENST00000454675 477 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RPL7P18-201ENST00000478965 734 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC114322.1-201ENST00000506771 926 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC011260.1-201ENST00000578420 472 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 BNIP3P8-201ENST00000597863 560 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 MIR1264-201ENST00000616374 69 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 DDX10P1-201ENST00000448545 1933 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-921P-201ENST00000384361 107 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-920P-201ENST00000410926 92 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RPS26P30-201ENST00000443431 335 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 BMI1P1-201ENST00000445879 941 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC092757.1-201ENST00000467293 467 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 MTND4LP3-201ENST00000468320 276 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC069528.1-202ENST00000482888 637 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RPS15AP34-201ENST00000487776 387 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC022662.1-201ENST00000580252 331 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC005498.1-201ENST00000592125 465 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC012443.1-201ENST00000605605 231 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AP000238.1-201ENST00000608759 426 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC004852.3-201ENST00000614131 326 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AL031601.2-202ENST00000622650 282 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 AC090617.9-201ENST00000623751 147 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 SNORA51.6-201ENST00000384151 125 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AL136380.1-201ENST00000447970 162 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC025918.2-201ENST00000558683 763 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 AC012360.2-201ENST00000609349 391 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 MIR7157-201ENST00000635801 60 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 MTND2P41-201ENST00000637599 773 ntBASIC1.46□□□□□ -2.18
KIAA1549Q9HCM3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AL359851.1-201ENST00000569460 4997 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC007560.1-201ENST00000426912 237 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC012497.1-201ENST00000429392 575 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 snoU109.4-201ENST00000458953 143 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 CABYRP1-201ENST00000465493 1045 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 RPL31P60-201ENST00000478450 367 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 EIF4EP3-201ENST00000498782 656 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC114786.4-201ENST00000508771 728 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC114797.1-201ENST00000514003 728 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 FAM60BP-201ENST00000578364 658 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 MIR5194-201ENST00000582634 120 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 VN1R88P-201ENST00000596787 292 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC010872.1-201ENST00000624225 675 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 Z98749.2-208ENST00000381646 500 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 RNU6-441P-201ENST00000384545 106 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 RPS7P9-201ENST00000414704 586 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 XKRYP1-201ENST00000423438 492 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 XKRYP2-201ENST00000432915 492 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 BX322784.1-201ENST00000455793 1077 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 OR9N1P-202ENST00000494289 481 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 CBX3P3-201ENST00000508108 532 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC007375.1-201ENST00000554513 578 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 BX322635.1-201ENST00000605804 496 ntBASIC1.45□□□□□ -2.18
KIAA1549Q9HCM3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 AC011477.1-204ENST00000623416 1325 ntBASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KIAA1549Q9HCM3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms