Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC096745.1-201ENST00000509945 370 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC103783.1-201ENST00000520506 373 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AP005902.1-201ENST00000521358 186 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AP006587.4-201ENST00000526053 529 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC005357.1-201ENST00000588399 301 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC068790.4-201ENST00000602474 263 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AL109918.3-201ENST00000603072 338 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AL161423.1-201ENST00000613700 262 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AL359547.2-201ENST00000615810 418 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC009951.1-201ENST00000623674 2614 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 AC027287.1-201ENST00000553115 1453 ntBASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.05□□□□□ -1.76
SEC61A2Q9H9S3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC007529.1-201ENST00000418574 2178 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 SNORA70F-201ENST00000384142 135 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 MIR659-201ENST00000384963 97 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-1109P-201ENST00000391187 107 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC097713.2-201ENST00000430199 356 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 SNORD5.1-201ENST00000458800 75 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 RPL21P103-201ENST00000479921 488 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC116655.1-201ENST00000508324 901 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 OR51K1P-201ENST00000510214 950 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 Y_RNA.721-201ENST00000517207 102 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 IGKV1-32-201ENST00000519290 311 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 GNAI2P1-201ENST00000541815 315 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC006254.3-201ENST00000603353 884 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC091905.2-201ENST00000623143 306 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC027228.2-201ENST00000567141 2154 ntBASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SEC61A2Q9H9S3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 EOGT-210ENST00000615922 1931 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC021146.4-201ENST00000309229 279 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-288P-201ENST00000363690 104 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 SNORA23-201ENST00000365128 182 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-214P-201ENST00000384130 107 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-823P-201ENST00000391042 103 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RNU2-3P-201ENST00000410144 191 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RPEP3-201ENST00000425462 676 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RPL21P91-201ENST00000429231 479 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AL359672.1-201ENST00000442302 409 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AL353752.1-201ENST00000454946 260 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC084198.1-201ENST00000477747 402 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 SLC25A15P5-201ENST00000508033 253 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC092436.3-201ENST00000511788 257 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC007016.1-201ENST00000512110 244 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 HSBP1P1-201ENST00000555205 166 ntBASIC4.03□□□□□ -1.76
SEC61A2Q9H9S3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms