Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LARP7P3-201ENST00000579888 337 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 BNIP3P22-201ENST00000593399 556 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 BNIP3P31-201ENST00000604515 566 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC109809.1-201ENST00000619665 545 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC006386.2-201ENST00000624491 75 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC012005.1-201ENST00000624575 75 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.56□□□□□ -2
LRRC40Q9H9A6 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 AC009902.3-201ENST00000606235 2172 ntBASIC2.56□□□□□ -2
LRRC40Q9H9A6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC40Q9H9A6 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRRC40Q9H9A6 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL162578.1-201ENST00000406202 378 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 RNU2-52P-201ENST00000410680 190 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 BTF3L4P3-201ENST00000418879 476 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 MTCO3P30-201ENST00000426425 670 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 MED14P1-201ENST00000430517 648 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 OSTCP8-201ENST00000445117 448 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC233279.1-201ENST00000455300 423 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC108729.1-201ENST00000487812 947 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC098591.2-201ENST00000510152 315 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC022447.1-201ENST00000515358 464 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC40Q9H9A6 EIF4BP1-201ENST00000554881 351 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 AL359212.1-201ENST00000556608 614 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 AP000403.1-201ENST00000603349 851 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 HMGB1P24-202ENST00000615653 685 ntBASIC2.55□□□□□ -2
LRRC40Q9H9A6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LRRC40Q9H9A6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRRC40Q9H9A6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.54□□□□□ -2
LRRC40Q9H9A6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.54□□□□□ -2
LRRC40Q9H9A6 BPY2DP-201ENST00000422208 265 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 MTCO2P17-201ENST00000424336 677 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 SNRPEP9-201ENST00000436794 238 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 MTCO3P45-201ENST00000443036 613 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AL358794.1-201ENST00000445689 381 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC40Q9H9A6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC40Q9H9A6 RPS27P27-201ENST00000498779 255 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC110760.3-202ENST00000515177 371 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC060771.1-201ENST00000582031 164 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.54□□□□□ -2
LRRC40Q9H9A6 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 OR2AS2P-201ENST00000606902 342 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC092574.1-201ENST00000609771 420 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC245297.2-201ENST00000610119 565 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
LRRC40Q9H9A6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LRRC40Q9H9A6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC004520.1-201ENST00000608362 1413 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 SNORA80A-201ENST00000363922 136 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 RNU6-777P-201ENST00000364265 104 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 RNU6-853P-201ENST00000364306 107 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 Y_RNA.245-201ENST00000364493 95 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 U3.26-201ENST00000391236 204 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC096649.2-201ENST00000416186 393 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 SEPT2P1-201ENST00000419651 180 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 MTCO1P53-201ENST00000441633 699 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 COX6CP12-201ENST00000446748 202 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 TPT1P14-201ENST00000448018 505 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 MTND5P13-201ENST00000513046 1079 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC023538.1-201ENST00000534576 736 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 DNAJC19P3-201ENST00000594491 331 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 AC004805.2-201ENST00000605382 482 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 AL133445.2-201ENST00000611191 527 ntBASIC2.53□□□□□ -2
LRRC40Q9H9A6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.53□□□□□ -2
LRRC40Q9H9A6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRRC40Q9H9A6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LRRC40Q9H9A6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms