Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC112200.1-201ENST00000625015 234 ntBASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 AC091925.2-201ENST00000625059 256 ntBASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BCAS3Q9H6U6 MARK2P15-201ENST00000432204 2186 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 ZNF519P1-201ENST00000449011 1626 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.193-201ENST00000363979 102 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.252-201ENST00000364556 101 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.399-201ENST00000383955 105 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1106P-201ENST00000390845 107 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 RNU6-550P-201ENST00000391057 101 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AL109755.1-201ENST00000401791 649 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 RN7SKP159-201ENST00000410657 292 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 MCFD2P1-201ENST00000417812 300 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 SNAP23P1-201ENST00000433229 246 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AL358232.1-201ENST00000448030 501 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC239809.1-201ENST00000450470 217 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 BTF3P15-201ENST00000455606 336 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC104806.1-201ENST00000508720 308 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC007566.2-201ENST00000603642 413 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC012409.4-201ENST00000612923 249 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 AC083806.3-201ENST00000614016 455 ntBASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BCAS3Q9H6U6 MAPK10-253ENST00000641010 4072 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNA5SP124-201ENST00000362739 110 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1287P-201ENST00000362914 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-601P-201ENST00000384540 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1127P-201ENST00000384580 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-310P-201ENST00000384655 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1060P-201ENST00000384664 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 MRPL42P3-201ENST00000401492 326 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNA5SP146-201ENST00000410743 123 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 Y_RNA.618-201ENST00000410949 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-1304P-201ENST00000411374 106 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC005019.1-201ENST00000436455 431 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC135721.1-201ENST00000497954 479 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC008526.1-201ENST00000509149 338 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 HIGD1AP13-201ENST00000509878 289 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 PPBPP1-201ENST00000510807 373 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 RNU6-27P-201ENST00000516146 107 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC110588.1-201ENST00000559699 137 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC025627.2-201ENST00000576220 160 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC138761.3-201ENST00000579993 334 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC008739.3-201ENST00000603262 127 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 AC025588.3-201ENST00000604182 274 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 FP236240.3-201ENST00000623061 327 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 MTND4P1-201ENST00000457501 1466 ntBASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BCAS3Q9H6U6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RNA5SP52-201ENST00000362448 134 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 SNORD3E-201ENST00000362899 217 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RNU6-525P-201ENST00000363685 104 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 SNORA70.4-201ENST00000365509 134 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RNU6-516P-201ENST00000411381 104 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC009310.1-201ENST00000414414 451 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RPS15AP27-201ENST00000449183 343 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RPL30P15-201ENST00000457129 321 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms