Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 FAM103A2P-201ENST00000444122 354 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 MRPS31P2-201ENST00000451581 518 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RPL23AP14-201ENST00000468281 468 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC083798.1-201ENST00000472671 131 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AP001025.2-201ENST00000490908 477 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC023194.1-201ENST00000493084 308 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RNU6-327P-201ENST00000516270 127 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC022616.6-201ENST00000520479 119 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 PSMA3P-201ENST00000555485 635 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 MIR3167-201ENST00000579623 85 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RNU6-87P-201ENST00000607561 108 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL391813.2-201ENST00000609113 322 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL161734.1-201ENST00000609720 557 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 MIR7851-201ENST00000610611 160 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 MIR8058-201ENST00000615737 89 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 CKAP2P1-201ENST00000555477 2049 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RNU4-1-201ENST00000363925 141 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 BTBD10P2-201ENST00000404779 676 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC078974.1-201ENST00000411597 223 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC127391.1-201ENST00000411737 98 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL590233.1-201ENST00000430017 456 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RPL36AP53-201ENST00000432891 316 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RN7SL601P-201ENST00000471221 293 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RNU6-714P-201ENST00000516963 103 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AP005597.4-201ENST00000526762 229 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC243972.3-201ENST00000539655 198 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC123904.2-201ENST00000548059 300 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL133173.2-201ENST00000614270 90 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL713922.2-201ENST00000619384 716 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 U4.6-201ENST00000621618 127 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 MIR3651-201ENST00000630427 90 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 AL049781.1-201ENST00000623195 3585 ntBASIC3.7□□□□□ -1.82
EBF3Q9H4W6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
EBF3Q9H4W6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU6-28P-201ENST00000362378 107 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU4-35P-201ENST00000362588 141 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU1-33P-201ENST00000364249 162 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 SNORA69-201ENST00000383895 132 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU6-730P-201ENST00000383954 104 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RPL23AP32-201ENST00000395315 459 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 MTATP6P18-201ENST00000417994 673 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RPL31P45-201ENST00000419532 356 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms