Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL353777.1-201ENST00000425552 326 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 SNRPEP4-201ENST00000435815 279 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 TAAR7P-201ENST00000436141 242 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 MTND1P30-201ENST00000441241 901 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AP000797.1-201ENST00000478870 387 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 RPL23AP41-201ENST00000484754 458 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 TTC39CP1-201ENST00000512513 755 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 LARP7P3-201ENST00000579888 337 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 MIR4293-201ENST00000584305 78 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC245517.5-201ENST00000611529 162 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC013476.2-201ENST00000614456 459 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC010133.1-201ENST00000615809 842 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC006386.2-201ENST00000624491 75 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC012005.1-201ENST00000624575 75 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX25Q9H3E2 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
SNX25Q9H3E2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU4-21P-201ENST00000362802 126 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU5F-7P-201ENST00000363696 115 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU5A-8P-201ENST00000364102 114 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU6-7-201ENST00000364784 107 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU6-8-201ENST00000365467 107 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU6-533P-201ENST00000384144 107 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 TXNP7-201ENST00000406296 293 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 USP9YP36-201ENST00000424581 829 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AL139132.1-201ENST00000431587 344 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC092573.2-201ENST00000434546 243 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 SETP8-201ENST00000435341 628 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC005094.1-201ENST00000440420 368 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 UBE2D3P4-201ENST00000441973 436 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 ELOCP30-201ENST00000447108 299 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RPS27AP8-201ENST00000452665 445 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RPS20P20-201ENST00000460498 340 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 CDC42P4-201ENST00000510507 563 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 RNU6-1256P-201ENST00000516539 103 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AL355836.1-201ENST00000555951 870 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC011471.1-201ENST00000585766 187 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC012065.4-201ENST00000602445 679 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC002076.2-201ENST00000617362 122 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC078883.4-201ENST00000623218 367 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC027309.3-201ENST00000623419 351 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 AC091931.1-201ENST00000623488 728 ntBASIC3.09□□□□□ -1.91
SNX25Q9H3E2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX25Q9H3E2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.09□□□□□ -1.92
SNX25Q9H3E2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 MT-TH-201ENST00000387441 69 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RPS4XP3-201ENST00000398541 413 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 Y_RNA.608-201ENST00000410647 95 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RNA5SP344-201ENST00000411081 104 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RN7SKP140-201ENST00000411196 284 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX25Q9H3E2 CYCSP46-201ENST00000423569 204 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 MED14P1-201ENST00000430517 648 ntBASIC3.08□□□□□ -1.92
SNX25Q9H3E2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms