Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RPL32P14-201ENST00000463196 378 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC027575.1-201ENST00000481064 460 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 SAP18P1-201ENST00000512058 390 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 NRBF2P1-201ENST00000587407 859 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 AP002906.1-201ENST00000603405 233 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 AC010378.1-201ENST00000619270 362 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 AL512506.2-201ENST00000624472 458 ntBASIC1.76□□□□□ -2.13
VCX3BQ9H321 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.76□□□□□ -2.13
VCX3BQ9H321 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 RNU6-353P-201ENST00000364266 108 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 RNU6-657P-201ENST00000383904 107 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 HMGN2P39-201ENST00000398005 273 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 TAF13P2-201ENST00000416876 286 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC092634.6-201ENST00000418558 192 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 SFR1P2-201ENST00000421841 730 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 RAC1P8-201ENST00000427086 527 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC241584.1-201ENST00000438469 1241 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 RPL26P6-201ENST00000440913 438 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 GXYLT1P1-201ENST00000446657 490 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AP1S2P1-201ENST00000457344 379 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VCX3BQ9H321 AF213884.2-201ENST00000510417 903 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC124947.2-202ENST00000552735 133 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 GTF3AP2-201ENST00000557014 266 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 AL671309.1-201ENST00000603750 544 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 AL589743.7-201ENST00000612637 233 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 AC012150.2-201ENST00000621300 544 ntBASIC1.75□□□□□ -2.13
VCX3BQ9H321 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.75□□□□□ -2.13
VCX3BQ9H321 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3BQ9H321 OR5J1P-201ENST00000313544 939 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VCX3BQ9H321 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3BQ9H321 OR9R1P-201ENST00000412200 877 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VCX3BQ9H321 RPL12P25-201ENST00000455592 494 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.74□□□□□ -2.13
VCX3BQ9H321 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.74□□□□□ -2.13
VCX3BQ9H321 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 SETP6-201ENST00000479329 568 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC011825.1-201ENST00000484967 388 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.74□□□□□ -2.13
VCX3BQ9H321 RNA5SP137-201ENST00000516833 135 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AP001317.1-201ENST00000531194 960 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 LARP7P2-201ENST00000575306 125 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AL078605.1-201ENST00000603529 500 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC012467.1-201ENST00000607740 256 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC003001.2-201ENST00000616294 831 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 AC026634.1-201ENST00000634369 198 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 OR4G11P-202ENST00000642116 1414 ntBASIC1.74□□□□□ -2.13
VCX3BQ9H321 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 MIR135A2-201ENST00000384854 100 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 HMGB1P17-201ENST00000403495 628 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 BTF3P7-201ENST00000407097 488 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 PTGES3P2-201ENST00000407942 482 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 RNA5SP450-201ENST00000411206 102 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 RNU6-575P-201ENST00000411326 105 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 RPL30P4-201ENST00000429309 333 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL512637.2-201ENST00000431287 1256 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 AC107083.1-201ENST00000439643 279 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 PIGFP3-201ENST00000441918 722 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 HMGB1P36-201ENST00000487709 576 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AC080014.1-201ENST00000496877 1201 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AC091860.1-201ENST00000505723 432 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 SNORA31.6-201ENST00000516241 130 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 MIR4789-201ENST00000577469 82 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 MIR4666A-201ENST00000580160 79 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.73□□□□□ -2.13
VCX3BQ9H321 SEPT7P9-203ENST00000604116 343 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AL031176.1-201ENST00000604554 466 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 AC007938.3-201ENST00000604965 623 ntBASIC1.73□□□□□ -2.13
VCX3BQ9H321 Y_RNA.783-201ENST00000613546 102 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms