Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
AMBRA1Q9C0C7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RNY3P1-201ENST00000365085 102 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RNY3-201ENST00000365484 102 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-76P-201ENST00000384060 104 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.530-201ENST00000384587 101 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 MIR124-3-201ENST00000384866 87 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RNU4-46P-201ENST00000410818 138 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RN7SKP140-201ENST00000411196 284 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 HSPE1P1-201ENST00000421494 318 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 UQCRHP4-201ENST00000471686 272 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RNU7-143P-201ENST00000516781 65 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AC008489.1-201ENST00000524271 483 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AP006587.4-201ENST00000526053 529 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 RANP3-201ENST00000530970 276 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AC109635.4-202ENST00000531666 412 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 HPRT1P3-201ENST00000539521 576 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 OR8R1P-201ENST00000543943 764 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL118558.2-201ENST00000556294 238 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL357559.1-201ENST00000622228 274 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 MIR1302-1-201ENST00000637932 143 ntBASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
AMBRA1Q9C0C7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC090337.1-201ENST00000579651 2074 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU1-18P-201ENST00000363062 164 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-82P-201ENST00000363970 107 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU1-132P-201ENST00000364300 164 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 U3.12-201ENST00000364498 214 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.378-201ENST00000365652 113 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-550P-201ENST00000391057 101 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 HMGN2P8-201ENST00000391458 268 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AL356057.2-201ENST00000403318 432 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC244098.2-201ENST00000422068 99 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 FABP5P13-201ENST00000452144 328 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC233279.1-201ENST00000455300 423 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RPL21P8-201ENST00000465083 535 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.691-201ENST00000516611 103 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-685P-201ENST00000517088 95 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 SNORA31.22-201ENST00000517204 135 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC022655.2-201ENST00000577280 318 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 MIR3138-201ENST00000585238 82 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC104763.2-201ENST00000604179 382 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC113139.1-201ENST00000605049 239 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AL022345.1-201ENST00000607292 135 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms