Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC079791.1-201ENST00000605356 973 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 OR10AB1P-201ENST00000609613 938 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC073569.3-201ENST00000619055 682 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC073308.1-201ENST00000623696 305 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM4Q9C037 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM4Q9C037 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 DEFB108F-201ENST00000344638 222 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 SNORD51-201ENST00000384320 80 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 RNU6-920P-201ENST00000410926 92 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AL139156.1-201ENST00000412785 841 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC098614.2-201ENST00000426040 255 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 GTF2IP20-201ENST00000431663 360 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 RPL23AP16-201ENST00000441715 421 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 USP9YP8-201ENST00000441913 500 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC009237.8-201ENST00000445492 379 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 Z82190.1-201ENST00000454534 490 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 SNORA31.23-201ENST00000517219 133 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 DEFB108D-201ENST00000527787 222 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC005498.1-201ENST00000592125 465 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AC025594.3-201ENST00000613068 790 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.98□□□□□ -2.09
TRIM4Q9C037 AL590099.1-201ENST00000615276 138 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 MIR7515-201ENST00000637837 67 ntBASIC1.98□□□□□ -2.09
TRIM4Q9C037 RNU6-1035P-201ENST00000384477 107 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 RNU6-1005P-201ENST00000384519 107 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 MIR525-201ENST00000384978 85 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC024082.2-201ENST00000434771 238 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 ANKRD26P4-201ENST00000455755 950 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 MTCO3P2-201ENST00000457365 171 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC109464.2-201ENST00000510242 943 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 RNU6-416P-201ENST00000516265 103 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 MIR3921-201ENST00000577308 85 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 AC104307.1-201ENST00000616142 196 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.97□□□□□ -2.09
TRIM4Q9C037 OR5H6-203ENST00000642105 978 ntBASIC1.97□□□□□ -2.09
TRIM4Q9C037 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM4Q9C037 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM4Q9C037 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM4Q9C037 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL355615.1-201ENST00000406187 641 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL590084.1-201ENST00000407885 387 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 UBE2V1P11-201ENST00000411559 285 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 RPL31P54-201ENST00000429803 370 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 ZNF965P-201ENST00000432501 817 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL592447.1-201ENST00000447592 540 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC006499.2-201ENST00000513470 337 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC015688.2-201ENST00000584523 262 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC105224.1-201ENST00000587055 421 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL355877.2-201ENST00000603670 358 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL356585.4-201ENST00000623078 1229 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AL356266.1-201ENST00000623311 483 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC090772.4-201ENST00000623599 362 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 AC010872.1-201ENST00000624225 675 ntBASIC1.96□□□□□ -2.1
TRIM4Q9C037 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM4Q9C037 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
TRIM4Q9C037 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM4Q9C037 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM4Q9C037 RPL21P1-201ENST00000399532 476 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AL133384.1-201ENST00000412744 351 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC099548.1-201ENST00000421443 426 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 TPTE2P1-204ENST00000435256 593 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms