Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC130324.3-201ENST00000614165 542 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RMST_7.1-201ENST00000621935 268 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 TPTEP1-208ENST00000636884 213 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC008013.2-202ENST00000637965 364 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 BDP1P-201ENST00000582658 1990 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 SNORA38.1-201ENST00000364172 131 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RNU6-74P-201ENST00000384235 107 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RNU6-39P-201ENST00000384344 107 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 MIR490-201ENST00000384865 128 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL162578.1-201ENST00000406202 378 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL354719.1-201ENST00000406535 843 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP16-201ENST00000410180 299 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RNU2-36P-201ENST00000410361 191 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL356867.1-201ENST00000429623 299 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RPL23AP30-201ENST00000432419 501 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 VDAC1P3-201ENST00000434069 851 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RPL7P42-201ENST00000481005 679 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RNA5SP401-201ENST00000515920 127 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AP005597.4-201ENST00000526762 229 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 OR5BN1P-201ENST00000532955 829 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL355836.1-201ENST00000555951 870 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AC020661.2-201ENST00000560114 134 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 LARP7P3-201ENST00000579888 337 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 MIR3945-201ENST00000581853 98 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AP001330.4-201ENST00000604350 154 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 uc_338.11-201ENST00000619132 160 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 AL049781.1-201ENST00000623195 3585 ntBASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LRFN3Q9BTN0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 RNU4-48P-201ENST00000365559 182 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 RNU6-738P-201ENST00000384531 106 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 FTH1P6-201ENST00000430768 320 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC016691.1-201ENST00000441321 413 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL356010.1-201ENST00000456364 102 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC025518.1-201ENST00000479856 347 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC106872.2-201ENST00000494303 480 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC116562.3-201ENST00000506136 177 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 HMGB3P16-201ENST00000508037 287 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC112206.3-201ENST00000514578 389 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SNORD27.1-201ENST00000516319 72 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SNORA40.12-201ENST00000516329 111 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 RNU2-58P-201ENST00000516403 183 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC068587.5-201ENST00000528506 175 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 OR5D17P-201ENST00000531492 978 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC023050.3-201ENST00000541142 333 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 MED28P6-201ENST00000558776 231 ntBASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN3Q9BTN0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms