Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU5A-1-201ENST00000362698 116 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 U6atac.2-201ENST00000408644 118 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC009963.1-201ENST00000417265 157 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC018630.2-202ENST00000422992 927 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 MTND4P24-201ENST00000424002 397 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 RPS3AP44-201ENST00000425466 790 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 Z93242.1-201ENST00000427102 353 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 DDX3P2-201ENST00000446138 111 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 RNU1-98P-201ENST00000458992 160 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 LARP1BP2-201ENST00000486594 519 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC112518.2-201ENST00000508565 425 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 HSPA8P13-201ENST00000523715 472 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 CYCSP2-201ENST00000558168 301 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL049838.1-201ENST00000563647 981 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 MIR4672-201ENST00000583126 81 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AL021997.1-201ENST00000605757 193 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC126118.1-201ENST00000607744 628 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 DBF4P1-201ENST00000412976 1892 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 WWP1P1-201ENST00000466609 2769 ntBASIC1.15□□□□□ -2.22
LIMD2Q9BT23 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.15□□□□□ -2.22
LIMD2Q9BT23 RNA5SP125-201ENST00000364843 120 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 RNA5SP160-201ENST00000364866 120 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 Y_RNA.500-201ENST00000384466 111 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 SNORD116-23-201ENST00000384645 92 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 RNU6-253P-201ENST00000384730 105 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL139098.1-201ENST00000407291 389 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL592310.1-201ENST00000414330 671 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 PSMA6P3-201ENST00000428242 164 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 MTCYBP45-201ENST00000435243 565 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 RPS15AP5-201ENST00000436276 388 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL353689.1-201ENST00000438895 199 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC096745.1-201ENST00000509945 370 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC091965.2-201ENST00000512324 613 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 MIR892C-201ENST00000516410 77 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AP005639.2-201ENST00000527592 928 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 CBX3P4-201ENST00000538909 354 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL512310.1-201ENST00000548639 172 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 OR4K8P-201ENST00000578842 1048 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AP001269.3-201ENST00000588718 329 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AP000403.1-201ENST00000603349 851 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC005034.5-201ENST00000604219 466 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL355802.4-201ENST00000607635 548 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AL136981.2-201ENST00000617319 734 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 MIR6130-201ENST00000619419 109 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC116618.1-201ENST00000634617 774 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 MKKS-204ENST00000639674 192 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LIMD2Q9BT23 AC104454.1-201ENST00000421341 1401 ntBASIC1.15□□□□□ -2.23
LIMD2Q9BT23 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 RNU6-1159P-201ENST00000362933 107 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 MIR888-201ENST00000401186 77 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 OR9R1P-201ENST00000412200 877 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 PTP4A1P7-201ENST00000423476 514 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 FAM204CP-201ENST00000424489 642 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AL035407.1-201ENST00000429211 571 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AL139415.2-201ENST00000431968 163 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 GTF2IP7-202ENST00000436677 309 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 CBWD4P-201ENST00000445695 655 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 USP9YP34-201ENST00000453983 808 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 snoU109.1-201ENST00000459339 135 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.14□□□□□ -2.23
LIMD2Q9BT23 AL121769.1-201ENST00000469473 401 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 BZW1P2-201ENST00000473537 826 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 RPL9P6-201ENST00000492764 598 ntBASIC1.14□□□□□ -2.23
LIMD2Q9BT23 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms