Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VGLL1Q99990 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VGLL1Q99990 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VGLL1Q99990 AC004972.1-201ENST00000623934 2209 ntBASIC2.76□□□□□ -1.97
VGLL1Q99990 AC007656.2-201ENST00000624902 4547 ntBASIC2.76□□□□□ -1.97
VGLL1Q99990 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VGLL1Q99990 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VGLL1Q99990 AF127577.6-201ENST00000623352 2191 ntBASIC2.76□□□□□ -1.97
VGLL1Q99990 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.75□□□□□ -1.97
VGLL1Q99990 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VGLL1Q99990 SPRR2C-201ENST00000290702 219 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AL139276.1-201ENST00000311910 1001 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 Y_RNA.86-201ENST00000363020 111 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU6-1249P-201ENST00000363237 111 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNA5SP42-201ENST00000364278 115 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 Y_RNA.255-201ENST00000364581 97 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 SNORA73.2-201ENST00000364946 201 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU5E-6P-201ENST00000365574 115 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU6-805P-201ENST00000365643 106 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU6-637P-201ENST00000384050 107 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU6-213P-201ENST00000384051 104 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 MIR454-201ENST00000390180 115 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 SNORA3.3-201ENST00000408712 125 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
VGLL1Q99990 RNA5SP107-201ENST00000411358 122 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNU6-516P-201ENST00000411381 104 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 BEND7P1-201ENST00000422058 457 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 SRIP2-201ENST00000428470 166 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 MTND3P23-201ENST00000431980 347 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC098614.3-201ENST00000438957 440 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.75□□□□□ -1.97
VGLL1Q99990 MRPS31P2-201ENST00000451581 518 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.75□□□□□ -1.97
VGLL1Q99990 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.75□□□□□ -1.97
VGLL1Q99990 GMFBP1-201ENST00000467831 427 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC126389.1-201ENST00000477436 290 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC114786.4-201ENST00000508771 728 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 NDUFB9P3-201ENST00000521269 501 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC011979.2-201ENST00000527568 352 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 AC128657.1-201ENST00000549459 145 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 AC024619.4-201ENST00000580924 316 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 MIR4775-201ENST00000581168 75 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.75□□□□□ -1.97
VGLL1Q99990 NRBF2P5-201ENST00000603087 788 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AL606490.9-201ENST00000603331 271 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AL590392.1-201ENST00000604960 446 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 BNIP3P10-201ENST00000605360 577 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 RNA5SP108-201ENST00000605921 117 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC083809.1-201ENST00000615051 472 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 Y_RNA.804-201ENST00000615262 101 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AL354950.2-201ENST00000617939 290 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 AC010338.1-201ENST00000621823 717 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.75□□□□□ -1.97
VGLL1Q99990 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.75□□□□□ -1.97
VGLL1Q99990 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
VGLL1Q99990 AL513302.2-201ENST00000562313 1842 ntBASIC2.75□□□□□ -1.97
VGLL1Q99990 MTND4P12-201ENST00000498999 1377 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 AC073544.1-201ENST00000600110 1595 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VGLL1Q99990 RNU6-223P-201ENST00000362830 107 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 Y_RNA.61-201ENST00000362835 102 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RN7SKP227-201ENST00000364445 330 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RNU6-996P-201ENST00000365438 107 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 AC068538.1-201ENST00000376856 336 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VGLL1Q99990 AL109755.1-201ENST00000401791 649 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RNA5SP118-201ENST00000410385 109 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RNA5SP293-201ENST00000410527 113 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RNU6-1148P-201ENST00000410992 104 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 SSXP9-201ENST00000417503 292 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.74□□□□□ -1.97
VGLL1Q99990 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.74□□□□□ -1.97
VGLL1Q99990 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.74□□□□□ -1.97
VGLL1Q99990 AC245054.1-201ENST00000420944 258 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 AL158071.1-201ENST00000430315 461 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.74□□□□□ -1.97
VGLL1Q99990 RNU7-63P-201ENST00000459054 62 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.74□□□□□ -1.97
VGLL1Q99990 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.74□□□□□ -1.97
VGLL1Q99990 RN7SL385P-201ENST00000468873 276 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RN7SL132P-201ENST00000478131 296 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 AL163973.1-201ENST00000484753 577 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RPS15AP36-201ENST00000492022 382 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 RN7SL323P-201ENST00000494712 295 ntBASIC2.74□□□□□ -1.97
VGLL1Q99990 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VGLL1Q99990 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.74□□□□□ -1.97
VGLL1Q99990 AC025465.4-201ENST00000513422 638 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms