Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.54□□□□□ -2
CITED1Q99966 AC018692.3-201ENST00000623929 123 ntBASIC2.54□□□□□ -2
CITED1Q99966 AC008264.2-201ENST00000610193 3731 ntBASIC2.54□□□□□ -2
CITED1Q99966 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CITED1Q99966 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.54□□□□□ -2
CITED1Q99966 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.54□□□□□ -2
CITED1Q99966 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CITED1Q99966 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CITED1Q99966 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CITED1Q99966 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.54□□□□□ -2
CITED1Q99966 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.53□□□□□ -2
CITED1Q99966 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 MIR19A-201ENST00000384878 82 ntBASIC2.53□□□□□ -2
CITED1Q99966 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.53□□□□□ -2
CITED1Q99966 AL136116.1-201ENST00000403591 381 ntBASIC2.53□□□□□ -2
CITED1Q99966 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 AL513331.1-201ENST00000411908 397 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 VPS26BP1-201ENST00000417155 755 ntBASIC2.53□□□□□ -2
CITED1Q99966 USP12PX-201ENST00000432383 1057 ntBASIC2.53□□□□□ -2
CITED1Q99966 MTCYBP39-201ENST00000437562 491 ntBASIC2.53□□□□□ -2
CITED1Q99966 AL008629.1-201ENST00000438615 184 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 AL357552.1-201ENST00000445254 415 ntBASIC2.53□□□□□ -2
CITED1Q99966 AL606662.1-201ENST00000445763 553 ntBASIC2.53□□□□□ -2
CITED1Q99966 DDX3P2-201ENST00000446138 111 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.53□□□□□ -2
CITED1Q99966 KC877373.1-201ENST00000479066 408 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.53□□□□□ -2
CITED1Q99966 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 AC025281.1-201ENST00000567026 265 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC015917.1-201ENST00000579654 510 ntBASIC2.53□□□□□ -2
CITED1Q99966 PRELID3BP8-201ENST00000604148 295 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC112187.2-201ENST00000604345 283 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC018714.1-201ENST00000605028 208 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC135507.1-201ENST00000607214 561 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC034229.4-201ENST00000607861 441 ntBASIC2.53□□□□□ -2
CITED1Q99966 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.53□□□□□ -2
CITED1Q99966 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.53□□□□□ -2
CITED1Q99966 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.53□□□□□ -2
CITED1Q99966 AC099506.2-201ENST00000623074 221 ntBASIC2.53□□□□□ -2
CITED1Q99966 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
CITED1Q99966 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.53□□□□□ -2
CITED1Q99966 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
CITED1Q99966 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.53□□□□□ -2
CITED1Q99966 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CITED1Q99966 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.53□□□□□ -2.01
CITED1Q99966 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CITED1Q99966 MIR30E-201ENST00000362104 92 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 VTRNA1-1-201ENST00000363120 99 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 RNU6-660P-201ENST00000364566 109 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AL451054.2-201ENST00000420896 202 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CITED1Q99966 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC233279.1-201ENST00000455300 423 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.52□□□□□ -2.01
CITED1Q99966 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 RPL23AP67-201ENST00000465341 474 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC004924.1-201ENST00000480160 781 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC055855.1-201ENST00000489563 579 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC116347.2-201ENST00000514912 523 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 SNORA70.19-201ENST00000516717 90 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 ATP5F1P5-201ENST00000526403 760 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC123904.3-201ENST00000547218 814 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC093012.1-202ENST00000549403 582 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 H3F3AP1-201ENST00000559984 334 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AP001004.1-201ENST00000582468 324 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 MIR4307-201ENST00000582802 84 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.52□□□□□ -2.01
CITED1Q99966 VN1R90P-201ENST00000595717 726 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 OR2AS2P-201ENST00000606902 342 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 OR10AB1P-201ENST00000609613 938 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.52□□□□□ -2.01
CITED1Q99966 AC012150.2-201ENST00000621300 544 ntBASIC2.52□□□□□ -2.01
CITED1Q99966 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms