Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
NPAS2Q99743 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
NPAS2Q99743 FTLP6-201ENST00000355274 422 ntBASIC2.57□□□□□ -2
NPAS2Q99743 RNU4-68P-201ENST00000364314 141 ntBASIC2.57□□□□□ -2
NPAS2Q99743 SNORA68.1-201ENST00000364537 132 ntBASIC2.57□□□□□ -2
NPAS2Q99743 SNORD116.1-201ENST00000365628 92 ntBASIC2.57□□□□□ -2
NPAS2Q99743 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NPAS2Q99743 RNU6-432P-201ENST00000384196 109 ntBASIC2.57□□□□□ -2
NPAS2Q99743 RNU6-140P-201ENST00000384566 108 ntBASIC2.57□□□□□ -2
NPAS2Q99743 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
NPAS2Q99743 MIR888-201ENST00000401186 77 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AL356057.2-201ENST00000403318 432 ntBASIC2.57□□□□□ -2
NPAS2Q99743 CCNG1P1-201ENST00000406783 885 ntBASIC2.57□□□□□ -2
NPAS2Q99743 RNU6-584P-201ENST00000410350 95 ntBASIC2.57□□□□□ -2
NPAS2Q99743 RPL19P1-201ENST00000411635 428 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 RPS25P9-201ENST00000435591 252 ntBASIC2.57□□□□□ -2
NPAS2Q99743 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.57□□□□□ -2
NPAS2Q99743 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 RPS27P27-201ENST00000498779 255 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC021146.8-201ENST00000507455 733 ntBASIC2.57□□□□□ -2
NPAS2Q99743 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.57□□□□□ -2
NPAS2Q99743 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 AC100870.1-201ENST00000522035 505 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC123904.3-201ENST00000547218 814 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC136601.2-201ENST00000604356 474 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC008277.2-201ENST00000605196 797 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC007619.2-201ENST00000605743 379 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC008498.1-201ENST00000613012 531 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 AL050303.3-201ENST00000613704 284 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.57□□□□□ -2
NPAS2Q99743 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.57□□□□□ -2
NPAS2Q99743 AP003485.2-201ENST00000623636 610 ntBASIC2.57□□□□□ -2
NPAS2Q99743 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.57□□□□□ -2
NPAS2Q99743 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.57□□□□□ -2
NPAS2Q99743 AC099063.3-201ENST00000642066 185 ntBASIC2.57□□□□□ -2
NPAS2Q99743 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPAS2Q99743 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
NPAS2Q99743 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.56□□□□□ -2
NPAS2Q99743 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NPAS2Q99743 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
NPAS2Q99743 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPAS2Q99743 RNU6-289P-201ENST00000364093 107 ntBASIC2.56□□□□□ -2
NPAS2Q99743 RNU6-906P-201ENST00000384700 70 ntBASIC2.56□□□□□ -2
NPAS2Q99743 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
NPAS2Q99743 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.56□□□□□ -2
NPAS2Q99743 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.56□□□□□ -2
NPAS2Q99743 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.56□□□□□ -2
NPAS2Q99743 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.56□□□□□ -2
NPAS2Q99743 AC009296.1-201ENST00000443146 155 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AL606517.1-201ENST00000446914 387 ntBASIC2.56□□□□□ -2
NPAS2Q99743 EEF1E1P1-201ENST00000446998 430 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.56□□□□□ -2
NPAS2Q99743 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.56□□□□□ -2
NPAS2Q99743 SNORD109B-201ENST00000458961 67 ntBASIC2.56□□□□□ -2
NPAS2Q99743 SNORD109A-201ENST00000459128 67 ntBASIC2.56□□□□□ -2
NPAS2Q99743 RPL23AP70-201ENST00000483361 460 ntBASIC2.56□□□□□ -2
NPAS2Q99743 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AC135721.1-201ENST00000497954 479 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AC116353.3-201ENST00000511215 249 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AC118465.1-201ENST00000513820 1271 ntBASIC2.56□□□□□ -2
NPAS2Q99743 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.56□□□□□ -2
NPAS2Q99743 AC087276.1-201ENST00000529659 480 ntBASIC2.56□□□□□ -2
NPAS2Q99743 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.56□□□□□ -2
NPAS2Q99743 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.56□□□□□ -2
NPAS2Q99743 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.56□□□□□ -2
NPAS2Q99743 HMGN2P15-201ENST00000585707 270 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.56□□□□□ -2
NPAS2Q99743 OR1M4P-201ENST00000589199 287 ntBASIC2.56□□□□□ -2
NPAS2Q99743 RPP40P2-201ENST00000603596 712 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AL355877.2-201ENST00000603670 358 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AC239868.4-201ENST00000608318 671 ntBASIC2.56□□□□□ -2
NPAS2Q99743 AC024560.3-201ENST00000608482 349 ntBASIC2.56□□□□□ -2
NPAS2Q99743 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
NPAS2Q99743 RN7SKP226-201ENST00000364912 300 ntBASIC2.55□□□□□ -2
NPAS2Q99743 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.55□□□□□ -2
NPAS2Q99743 AL096701.2-201ENST00000416920 238 ntBASIC2.55□□□□□ -2
NPAS2Q99743 HMGB1P49-201ENST00000418882 569 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.55□□□□□ -2
NPAS2Q99743 USP9YP24-201ENST00000434374 697 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.55□□□□□ -2
NPAS2Q99743 MTCO3P45-201ENST00000443036 613 ntBASIC2.55□□□□□ -2
NPAS2Q99743 USP9YP17-201ENST00000444617 696 ntBASIC2.55□□□□□ -2
NPAS2Q99743 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.55□□□□□ -2
NPAS2Q99743 RPL23AP20-201ENST00000447965 421 ntBASIC2.55□□□□□ -2
NPAS2Q99743 OR6K1P-201ENST00000456766 971 ntBASIC2.55□□□□□ -2
NPAS2Q99743 MRPS17P3-201ENST00000465453 385 ntBASIC2.55□□□□□ -2
NPAS2Q99743 AC133134.1-201ENST00000466800 359 ntBASIC2.55□□□□□ -2
NPAS2Q99743 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
NPAS2Q99743 RPL36AP51-201ENST00000487216 318 ntBASIC2.55□□□□□ -2
NPAS2Q99743 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.55□□□□□ -2
NPAS2Q99743 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms