Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC146507.1-201ENST00000468335 354 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.85□□□□□ -2.27
COL12A1Q99715 AC010735.1-201ENST00000567305 1026 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AL136520.1-201ENST00000600311 1322 ntBASIC0.84□□□□□ -2.27
COL12A1Q99715 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
COL12A1Q99715 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.84□□□□□ -2.27
COL12A1Q99715 ATG12P2-201ENST00000456830 416 ntBASIC0.84□□□□□ -2.27
COL12A1Q99715 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.84□□□□□ -2.27
COL12A1Q99715 Y_RNA.571-201ENST00000384753 98 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 MTND4LP12-201ENST00000448237 295 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 AC234775.1-201ENST00000454247 670 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 HMGB3P30-201ENST00000457863 606 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 RPL30P12-201ENST00000474666 353 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 AP001960.1-201ENST00000506494 658 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 AP005597.4-201ENST00000526762 229 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 Z69720.2-201ENST00000624755 279 ntBASIC0.84□□□□□ -2.28
COL12A1Q99715 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.84□□□□□ -2.28
COL12A1Q99715 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL12A1Q99715 RNU6-234P-201ENST00000365229 104 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 RNU6-997P-201ENST00000384725 107 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AL356057.2-201ENST00000403318 432 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AC009302.1-201ENST00000417147 390 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 HSFY3P-201ENST00000444242 1191 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 MTCO1P40-201ENST00000574371 625 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 BX322635.1-201ENST00000605804 496 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
COL12A1Q99715 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
COL12A1Q99715 RN7SKP51-201ENST00000410781 304 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 PGBD4P3-201ENST00000440731 581 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 RPS29P23-201ENST00000458635 123 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AC067942.3-201ENST00000512025 362 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.83□□□□□ -2.28
COL12A1Q99715 AC125611.2-201ENST00000551907 647 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.83□□□□□ -2.28
COL12A1Q99715 Y_RNA.142-201ENST00000363491 102 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 COX6CP18-201ENST00000448769 222 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AC104472.2-201ENST00000469035 601 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 RPS23P3-201ENST00000470993 430 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.83□□□□□ -2.28
COL12A1Q99715 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.83□□□□□ -2.28
COL12A1Q99715 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.83□□□□□ -2.28
COL12A1Q99715 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COL12A1Q99715 NACAP2-201ENST00000318548 624 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 RNU6-288P-201ENST00000363690 104 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.82□□□□□ -2.28
COL12A1Q99715 MIR513A1-201ENST00000385138 129 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 BX682237.1-201ENST00000415016 335 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 AC114322.1-201ENST00000506771 926 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 AP003497.1-201ENST00000528472 562 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 MIR5589-201ENST00000579442 60 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.82□□□□□ -2.28
COL12A1Q99715 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
COL12A1Q99715 RNU4-31P-201ENST00000384211 141 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 AC092447.6-201ENST00000414578 210 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 GPM6BP3-201ENST00000442797 145 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 AC112198.4-201ENST00000515450 351 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 OR4R1P-201ENST00000529879 463 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.82□□□□□ -2.28
COL12A1Q99715 AC113368.1-201ENST00000603736 382 ntBASIC0.82□□□□□ -2.28
COL12A1Q99715 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL12A1Q99715 RNA5SP492-201ENST00000411330 114 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.81□□□□□ -2.28
COL12A1Q99715 RPL7P31-201ENST00000450192 724 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.81□□□□□ -2.28
COL12A1Q99715 SNORD108-201ENST00000459332 71 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.81□□□□□ -2.28
COL12A1Q99715 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 RNU6-30P-201ENST00000384561 107 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL12A1Q99715 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.81□□□□□ -2.28
COL12A1Q99715 RN7SKP179-201ENST00000516126 217 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.81□□□□□ -2.28
COL12A1Q99715 DUXAP4-201ENST00000603046 613 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 DPRXP5-201ENST00000604662 539 ntBASIC0.81□□□□□ -2.28
COL12A1Q99715 NUP35P2-201ENST00000416748 943 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.8□□□□□ -2.28
COL12A1Q99715 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.8□□□□□ -2.28
COL12A1Q99715 MTND4P27-201ENST00000450813 1354 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.8□□□□□ -2.28
COL12A1Q99715 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.8□□□□□ -2.28
COL12A1Q99715 BZW1P2-201ENST00000473537 826 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 RNU2-44P-201ENST00000516795 194 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 AC074029.2-201ENST00000551045 634 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 AC084757.1-201ENST00000559987 490 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.8□□□□□ -2.28
COL12A1Q99715 AC146944.4-201ENST00000602697 718 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 SNORD114-21-201ENST00000606412 72 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.8□□□□□ -2.28
COL12A1Q99715 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
COL12A1Q99715 MIR1285-1-201ENST00000408593 84 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 MIR1912-201ENST00000410389 80 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 ARF4P4-201ENST00000439608 520 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.8□□□□□ -2.28
COL12A1Q99715 AC009901.1-201ENST00000506703 541 ntBASIC0.8□□□□□ -2.28
COL12A1Q99715 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
COL12A1Q99715 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.79□□□□□ -2.28
COL12A1Q99715 MIR150-201ENST00000385048 84 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms