Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX2Q99626 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.32□□□□□ -2.04
CDX2Q99626 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX2Q99626 LSM1P1-201ENST00000438629 273 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC092473.1-201ENST00000441098 221 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX2Q99626 OR6K5P-201ENST00000447050 945 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 RPL30P14-201ENST00000482744 348 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 TMEM251P1-201ENST00000503717 318 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 COX7A2P2-201ENST00000505291 250 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 SNORA70.16-201ENST00000516390 95 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX2Q99626 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDX2Q99626 SLC2A13P1-201ENST00000531560 322 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AP000857.1-201ENST00000532151 543 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX2Q99626 ELOCP31-201ENST00000540463 467 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX2Q99626 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX2Q99626 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 VN1R83P-201ENST00000595685 445 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 BNIP3P31-201ENST00000604515 566 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC112220.2-201ENST00000605513 533 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC103710.1-201ENST00000610003 901 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AL138478.1-201ENST00000612252 832 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.9-201ENST00000615427 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.11-201ENST00000616345 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.2-201ENST00000616535 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.3-201ENST00000617785 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.19-201ENST00000618602 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 RNU2-1-201ENST00000618664 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.6-201ENST00000619225 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.5-201ENST00000619465 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 AC084824.4-201ENST00000620106 731 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 U2.10-201ENST00000620268 191 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX2Q99626 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDX2Q99626 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX2Q99626 OR4G11P-202ENST00000642116 1414 ntBASIC2.32□□□□□ -2.04
CDX2Q99626 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.32□□□□□ -2.04
CDX2Q99626 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CDX2Q99626 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 RNU5E-10P-201ENST00000363506 118 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDX2Q99626 HMGN2P35-201ENST00000412164 270 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX2Q99626 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX2Q99626 AL590233.1-201ENST00000430017 456 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX2Q99626 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX2Q99626 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX2Q99626 MRPL50P4-201ENST00000446432 475 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AC005297.2-201ENST00000450430 606 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX2Q99626 MLLT10P2-201ENST00000506434 249 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 CBX3P3-201ENST00000508108 532 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX2Q99626 AC006499.2-201ENST00000513470 337 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX2Q99626 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX2Q99626 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX2Q99626 AC023043.3-201ENST00000593113 385 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AL355816.2-201ENST00000610049 647 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 AL596245.1-201ENST00000618994 362 ntBASIC2.31□□□□□ -2.04
CDX2Q99626 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX2Q99626 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX2Q99626 RNU6-661P-201ENST00000362409 107 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNU6-224P-201ENST00000384055 107 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 Y_RNA.578-201ENST00000390903 88 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNU6-1000P-201ENST00000391066 106 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNA5SP252-201ENST00000391131 119 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 FAT1P1-201ENST00000406588 507 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNU2-47P-201ENST00000410649 186 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RNU2-42P-201ENST00000410697 113 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX2Q99626 AL354692.1-201ENST00000423044 315 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX2Q99626 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.3□□□□□ -2.04
CDX2Q99626 MUPP-201ENST00000438111 566 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC092427.1-201ENST00000439177 601 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.3□□□□□ -2.04
CDX2Q99626 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX2Q99626 AL590664.1-201ENST00000448065 339 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 GSTA11P-201ENST00000452866 669 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC008571.1-201ENST00000467232 300 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC104982.1-201ENST00000478775 574 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 RPL9P33-201ENST00000484311 566 ntBASIC2.3□□□□□ -2.04
CDX2Q99626 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms