Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.83□□□□□ -2.28
CSMD1Q96PZ7 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
CSMD1Q96PZ7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.83□□□□□ -2.28
CSMD1Q96PZ7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.83□□□□□ -2.28
CSMD1Q96PZ7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC104308.1-201ENST00000454621 333 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 RPS29P23-201ENST00000458635 123 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC023050.2-201ENST00000544968 387 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC112503.2-201ENST00000609005 552 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 RNU1-109P-201ENST00000383960 147 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 FTH1P15-201ENST00000406984 280 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 RPL21P24-201ENST00000413752 448 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 HMGN1P10-201ENST00000474557 553 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 Z69720.2-201ENST00000624755 279 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 ZNF37BP-203ENST00000452306 1352 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 RNU6-418P-201ENST00000384035 107 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC104692.1-201ENST00000472406 90 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 AC083899.3-201ENST00000603413 594 ntBASIC0.82□□□□□ -2.28
CSMD1Q96PZ7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 HMGB3P30-201ENST00000457863 606 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 MIR514B-201ENST00000516774 80 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 UBE2L4-201ENST00000587688 464 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC012557.2-201ENST00000605919 418 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC004943.3-201ENST00000624116 600 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 RPL21P93-201ENST00000480465 489 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC233702.1-201ENST00000482905 502 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC093591.1-201ENST00000491435 481 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 MIR329-2-201ENST00000385029 84 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC022493.1-201ENST00000492984 337 ntBASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.81□□□□□ -2.28
CSMD1Q96PZ7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 HSPE1P26-201ENST00000405341 275 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC010625.1-201ENST00000511296 403 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 MTCO1P30-201ENST00000515244 580 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC073544.1-201ENST00000600110 1595 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 LINC01347-201ENST00000417964 355 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 GTF2IP12-201ENST00000456547 356 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AC239860.2-201ENST00000525886 270 ntBASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.8□□□□□ -2.28
CSMD1Q96PZ7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 MTCO1P43-201ENST00000431831 488 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 PGBD4P3-201ENST00000440731 581 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 MZT1P2-201ENST00000604387 248 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 DPRXP5-201ENST00000604662 539 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 SNORD56.5-201ENST00000364281 72 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 RPL21P90-201ENST00000415692 466 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 AL161651.1-201ENST00000440882 223 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.79□□□□□ -2.28
CSMD1Q96PZ7 RNU1-62P-201ENST00000362599 164 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 SNORD114-15-201ENST00000364687 72 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 SNORA6-201ENST00000384033 151 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 RNU6-30P-201ENST00000384561 107 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 GDI2P2-201ENST00000445131 608 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 COX6CP18-201ENST00000448769 222 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms