Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.09□□□□□ -1.6
SYNGAP1Q96PV0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SYNGAP1Q96PV0 AC091812.1-201ENST00000432235 1948 ntBASIC5.09□□□□□ -1.6
SYNGAP1Q96PV0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.424-201ENST00000384063 103 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-434P-201ENST00000384376 107 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.493-201ENST00000384422 102 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 MT-TC-201ENST00000387405 66 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-603P-201ENST00000411403 107 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RPLP0P7-201ENST00000416050 667 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 HIGD1AP11-201ENST00000438361 280 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RNU7-167P-201ENST00000459160 62 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AC090115.3-201ENST00000553218 849 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 HSBP1P1-201ENST00000555205 166 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AC007179.3-201ENST00000604976 235 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 SNHG22-203ENST00000617833 660 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 uc_338.13-201ENST00000618243 179 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AC138627.2-201ENST00000624202 601 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 SCN1A-220ENST00000641603 12506 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNGAP1Q96PV0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC011978.2-201ENST00000569835 2054 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNU1-132P-201ENST00000364300 164 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 SMIM11P1-201ENST00000369586 178 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 SNORD51-201ENST00000384320 80 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.489-201ENST00000384410 101 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.645-201ENST00000391229 102 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNA5SP317-201ENST00000410176 116 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNA5SP311-201ENST00000411290 116 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 EIF4EP1-201ENST00000422311 642 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 YME1L1P1-201ENST00000429435 297 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AL591212.2-201ENST00000433923 257 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 HMGB1P12-201ENST00000438594 598 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 MTND2P29-201ENST00000438595 412 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RPS24P13-201ENST00000442520 397 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC010655.1-201ENST00000449336 292 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC007967.1-201ENST00000455422 1159 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC117503.1-201ENST00000472241 394 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNA5SP315-201ENST00000516340 116 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNA5SP312-201ENST00000517068 116 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-685P-201ENST00000517088 95 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.721-201ENST00000517207 102 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 CR383656.7-201ENST00000548164 174 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC025423.5-201ENST00000550230 219 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 RN7SL176P-201ENST00000580352 264 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC012468.1-201ENST00000604888 430 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC062037.2-201ENST00000610137 73 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AC110801.1-201ENST00000623590 212 ntBASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNGAP1Q96PV0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-715P-201ENST00000365204 103 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AL022722.2-201ENST00000402519 180 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AL603908.1-201ENST00000406098 201 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 RNU4-65P-201ENST00000410473 140 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 RNA5SP296-201ENST00000410523 111 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 Z99755.1-201ENST00000414048 380 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 USMG5P1-201ENST00000425964 177 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 USP9YP30-201ENST00000430729 455 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AL353597.2-202ENST00000434901 373 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AL589765.3-201ENST00000446084 462 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 PARP4P3-201ENST00000510265 317 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC104136.1-201ENST00000512969 394 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-1069P-201ENST00000516612 133 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms