Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-1329P-201ENST00000365664 107 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 SET-203ENST00000372688 801 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RNU6-842P-201ENST00000384269 107 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 SNORA36C-201ENST00000384289 132 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 SNORA41-201ENST00000384675 132 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.574-201ENST00000384766 95 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 MIR517A-201ENST00000385001 87 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 MT-TG-201ENST00000387429 68 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AL080315.1-201ENST00000406055 466 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RNU6-55P-201ENST00000411092 107 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 CBX3P6-201ENST00000430257 527 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RN7SKP46-201ENST00000515942 234 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RNU6-635P-201ENST00000516651 102 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RNU4-60P-201ENST00000517239 135 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 NUTF2P8-201ENST00000604593 363 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 RNU6-85P-201ENST00000605989 107 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 MIR6715B-201ENST00000637172 77 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 ZNF137P-201ENST00000456718 1920 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL136964.1-201ENST00000622038 2990 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RNA5SP443-201ENST00000363083 132 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.151-201ENST00000363566 112 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RNA5SP505-201ENST00000364748 108 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.389-201ENST00000383924 113 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RNU6-26P-201ENST00000383985 107 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RNU6-398P-201ENST00000384143 109 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.534-201ENST00000384599 112 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 MIR578-201ENST00000384828 96 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 DPH3P2-201ENST00000422618 250 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 NUP35P1-201ENST00000422734 947 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 HMGB1P9-201ENST00000429856 646 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 TDGF1P1-201ENST00000445734 527 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL360271.2-201ENST00000447710 161 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RN7SL738P-201ENST00000470264 297 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 DEFB109F-201ENST00000491870 277 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC110794.1-201ENST00000505816 425 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 MTND3P25-201ENST00000509243 135 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC104576.1-201ENST00000524225 88 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RN7SL690P-201ENST00000582087 240 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AL031601.2-202ENST00000622650 282 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC139713.2-215ENST00000641428 5037 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 AC009812.4-201ENST00000569134 1805 ntBASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD1Q96NR3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 OR14L1P-202ENST00000641545 3009 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.188-201ENST00000363952 111 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC096664.2-201ENST00000411843 406 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC011933.1-201ENST00000413334 321 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 FTH1P25-201ENST00000447665 469 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 RPS29P33-201ENST00000456717 146 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC092451.1-201ENST00000480211 153 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC068781.1-201ENST00000488231 618 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 RPL36AP41-201ENST00000493820 306 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC108145.1-201ENST00000503770 153 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 VN1R104P-201ENST00000505115 1009 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 MRPS35P2-201ENST00000508242 191 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms