Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-600P-201ENST00000362524 99 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 Y_RNA.106-201ENST00000363189 100 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CALR3Q96L12 MIR323B-201ENST00000385269 82 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CALR3Q96L12 MIR708-201ENST00000390708 88 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.38□□□□□ -1.55
CALR3Q96L12 CBX3P6-201ENST00000430257 527 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AL159987.2-201ENST00000432754 307 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 VDAC1P3-201ENST00000434069 851 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 CHEK2P4-201ENST00000450340 246 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RN7SL517P-201ENST00000462240 305 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 AC020890.1-201ENST00000491837 504 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 RN7SL466P-201ENST00000497546 295 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 MTND4LP22-201ENST00000508209 276 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC005921.1-201ENST00000510589 286 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC023141.12-201ENST00000512399 199 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RNA5SP249-201ENST00000516127 99 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC144568.1-201ENST00000520139 137 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC131281.1-201ENST00000522984 164 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.38□□□□□ -1.55
CALR3Q96L12 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CALR3Q96L12 AC022404.1-201ENST00000555320 273 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 MIR5696-201ENST00000578474 85 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RN7SL52P-201ENST00000584271 284 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 AC234771.5-201ENST00000600161 514 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC069307.1-201ENST00000602820 447 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AL355598.1-201ENST00000604169 202 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC087783.2-201ENST00000605070 562 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 AC090425.1-201ENST00000610007 140 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RNA5SP440-201ENST00000612665 119 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 RN7SL787P-201ENST00000613000 284 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 HMGB1P24-202ENST00000615653 685 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 MIR8069-1-201ENST00000616627 86 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.38□□□□□ -1.55
CALR3Q96L12 MIR8069-2-201ENST00000621412 86 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CALR3Q96L12 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CALR3Q96L12 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.38□□□□□ -1.55
CALR3Q96L12 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CALR3Q96L12 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CALR3Q96L12 SCARNA15-201ENST00000607520 4325 ntBASIC5.38□□□□□ -1.55
CALR3Q96L12 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.38□□□□□ -1.55
CALR3Q96L12 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CALR3Q96L12 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 MTND5P9-201ENST00000503854 1755 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CALR3Q96L12 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CALR3Q96L12 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 Y_RNA.188-201ENST00000363952 111 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 RNA5SP189-201ENST00000364920 115 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AC013470.1-201ENST00000453438 462 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 RN7SL727P-201ENST00000482164 296 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 AC093852.1-201ENST00000503587 266 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 SLC25A15P5-201ENST00000508033 253 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 Y_RNA.719-201ENST00000517156 106 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 AC134698.5-201ENST00000519444 336 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AC004584.2-201ENST00000570407 410 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AL139395.1-201ENST00000603662 160 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 RPSAP73-201ENST00000614820 330 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 AC127024.6-201ENST00000621598 424 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.37□□□□□ -1.55
CALR3Q96L12 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.37□□□□□ -1.55
CALR3Q96L12 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CALR3Q96L12 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AC118273.1-201ENST00000525324 3006 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CALR3Q96L12 AC010733.2-201ENST00000589496 5702 ntBASIC5.37□□□□□ -1.55
CALR3Q96L12 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CALR3Q96L12 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CALR3Q96L12 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CALR3Q96L12 RNU6-1197P-201ENST00000391183 107 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AP000580.1-201ENST00000404439 358 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms