Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RPS3AP25-201ENST00000411660 793 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AL592310.1-201ENST00000414330 671 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AL161449.1-201ENST00000414531 1199 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 MTATP6P27-201ENST00000416987 621 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 RPS3AP44-201ENST00000425466 790 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 MTND2P20-201ENST00000440805 661 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 RPL26P6-201ENST00000440913 438 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC069528.1-202ENST00000482888 637 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 TMEM251P1-201ENST00000503717 318 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC098799.1-201ENST00000504752 800 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC020699.1-201ENST00000505161 445 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 RNA5SP356-201ENST00000515972 94 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 CKS1BP7-201ENST00000522230 235 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 HIGD1AP17-201ENST00000554576 276 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 HMGN2P15-201ENST00000585707 270 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 DUXAP11-201ENST00000603858 526 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AC069304.2-201ENST00000605154 435 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 AL138955.1-201ENST00000622881 1040 ntBASIC2.62□□□□□ -1.99
PKNOX2Q96KN3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC080100.1-201ENST00000624239 5356 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC005832.2-201ENST00000538921 1430 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 FTLP6-201ENST00000355274 422 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 MIR422A-201ENST00000362286 90 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 RNA5SP489-201ENST00000410986 109 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 MRPS36P1-201ENST00000421291 307 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 YME1L1P1-201ENST00000429435 297 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 RPS15AP5-201ENST00000436276 388 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 HSPE1P6-201ENST00000479457 291 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC093752.1-206ENST00000511823 336 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC010374.2-201ENST00000512933 535 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC103783.1-201ENST00000520506 373 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 OR4K8P-201ENST00000578842 1048 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 MIR3200-201ENST00000580767 85 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC004853.1-201ENST00000604902 698 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC112220.2-201ENST00000605513 533 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC024257.5-201ENST00000612739 531 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 AC006213.4-201ENST00000616184 634 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 WWP1P1-201ENST00000466609 2769 ntBASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PKNOX2Q96KN3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 RNU4-51P-201ENST00000364206 140 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 RNA5SP125-201ENST00000364843 120 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 SNORA9-201ENST00000384215 133 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 HMGB1P17-201ENST00000403495 628 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL033519.2-201ENST00000403958 392 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL162578.1-201ENST00000406202 378 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 U6atac.2-201ENST00000408644 118 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 OR4K6P-201ENST00000416478 897 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 MTCO2P17-201ENST00000424336 677 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 Z82210.1-201ENST00000440037 231 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 MTCO3P11-201ENST00000455103 774 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 RPL12P25-201ENST00000455592 494 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC079203.1-201ENST00000487972 404 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC114981.1-201ENST00000503897 678 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC022861.1-201ENST00000522981 663 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 LRRC6P1-201ENST00000532188 885 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 MIR1254-2-201ENST00000579553 63 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 MIR4429-201ENST00000580105 73 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AC092574.1-201ENST00000609771 420 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 AL596245.1-201ENST00000618994 362 ntBASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKNOX2Q96KN3 SNORA38.1-201ENST00000364172 131 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 DHFRP6-201ENST00000401776 268 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AL356057.3-201ENST00000402607 340 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 SNORD56-201ENST00000413522 71 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms