Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU6-193P-201ENST00000410977 107 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC018865.2-201ENST00000423631 129 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 HMGB1P12-201ENST00000438594 598 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 HMGB3P11-201ENST00000440127 604 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 RPS11P1-201ENST00000451072 473 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 BX276092.4-201ENST00000452056 248 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC010469.1-201ENST00000463864 576 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 TRBV1-201ENST00000476502 284 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC078817.1-201ENST00000492623 435 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 Y_RNA.668-201ENST00000516233 93 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC008694.2-201ENST00000517591 306 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC009812.2-201ENST00000517657 457 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC107934.1-201ENST00000522215 217 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 OR4R1P-201ENST00000529879 463 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 OR4T1P-201ENST00000554933 911 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 UBE2L4-201ENST00000587688 464 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AP001029.3-201ENST00000588063 596 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AL592436.1-201ENST00000605135 558 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AL162373.1-201ENST00000620433 407 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC078938.1-201ENST00000620993 318 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AL354798.1-201ENST00000622505 329 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 MTND5P28-201ENST00000438005 1594 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 Z82217.1-201ENST00000625157 8149 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 MTND5P10-201ENST00000603719 1809 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 Y_RNA.153-201ENST00000363615 91 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 U3.12-201ENST00000364498 214 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 Y_RNA.373-201ENST00000365600 103 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RNU6-38P-201ENST00000384085 107 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AL590704.1-201ENST00000402856 794 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 MIR1250-201ENST00000408098 113 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC093578.1-201ENST00000415219 368 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RPL7P10-201ENST00000417407 739 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC096644.2-201ENST00000429278 159 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AL358472.1-201ENST00000431295 329 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC069285.2-201ENST00000440210 275 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 TXNP1-201ENST00000441872 371 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RPL23AP33-201ENST00000442301 452 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 RNU6-333P-201ENST00000459117 107 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 MIR2053-201ENST00000459295 91 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 GMFBP1-201ENST00000467831 427 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC004062.1-201ENST00000509926 645 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC006499.6-201ENST00000511169 607 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 NDUFB4P9-201ENST00000511646 388 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RNU4-29P-201ENST00000515943 174 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 SCARNA24.1-201ENST00000516465 137 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RNU6-714P-201ENST00000516963 103 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RNU4-60P-201ENST00000517239 135 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 OR10AB1P-201ENST00000609613 938 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC007485.1-201ENST00000616755 206 ntBASIC4.17□□□□□ -1.74
CHFRQ96EP1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CHFRQ96EP1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHFRQ96EP1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHFRQ96EP1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHFRQ96EP1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHFRQ96EP1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHFRQ96EP1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHFRQ96EP1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.16□□□□□ -1.74
CHFRQ96EP1 AL512646.1-201ENST00000269395 1077 ntBASIC4.16□□□□□ -1.74
CHFRQ96EP1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CHFRQ96EP1 RNU6-1115P-201ENST00000362490 106 ntBASIC4.16□□□□□ -1.74
CHFRQ96EP1 RNA5SP22-201ENST00000365393 109 ntBASIC4.16□□□□□ -1.74
CHFRQ96EP1 SNORD6-201ENST00000365444 73 ntBASIC4.16□□□□□ -1.74
CHFRQ96EP1 U8.11-201ENST00000384699 133 ntBASIC4.16□□□□□ -1.74
CHFRQ96EP1 U8.12-201ENST00000384701 133 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms