Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC109583.1-201ENST00000432156 268 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC234775.1-201ENST00000454247 670 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC092902.1-201ENST00000486999 259 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 CYCSP23-201ENST00000519781 313 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 DUXAP3-201ENST00000603616 594 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC069304.3-201ENST00000603938 1084 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TTC28Q96AY4 RNU6-799P-201ENST00000363567 107 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 RNU4-31P-201ENST00000384211 141 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC004022.2-201ENST00000413824 193 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC007098.1-201ENST00000420122 367 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 BOLA3P3-201ENST00000505182 232 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 AP003497.1-201ENST00000528472 562 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AL049838.1-201ENST00000563647 981 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 AP002907.1-201ENST00000606361 1430 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
TTC28Q96AY4 RNU6-50P-201ENST00000362356 103 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 RNU6-317P-201ENST00000384031 107 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 SNRPGP13-201ENST00000442212 177 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 AC090617.7-201ENST00000623952 126 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 VTRNA1-1-201ENST00000363120 99 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 MIR936-201ENST00000401264 98 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 HMGB3P31-201ENST00000413333 595 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 HMGN2P38-201ENST00000423806 265 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 AC233728.2-201ENST00000425348 757 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 AC146944.4-201ENST00000602697 718 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TTC28Q96AY4 MIR6759-201ENST00000638110 65 ntBASIC1.1□□□□□ -2.23
TTC28Q96AY4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.1□□□□□ -2.23
TTC28Q96AY4 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 SNORA9.1-201ENST00000362412 131 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 SNORA51.2-201ENST00000364595 132 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 AC012497.1-201ENST00000429392 575 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 HMGN2P13-201ENST00000476476 274 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 MTCO3P35-201ENST00000485582 781 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.09□□□□□ -2.23
TTC28Q96AY4 AP001960.1-201ENST00000506494 658 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 AC096571.1-202ENST00000506634 735 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 AC113398.2-201ENST00000507630 558 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TTC28Q96AY4 SNORA31.16-201ENST00000516773 139 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.09□□□□□ -2.23
TTC28Q96AY4 AP003717.3-201ENST00000544832 1180 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 MIR3690-201ENST00000580266 75 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.09□□□□□ -2.23
TTC28Q96AY4 DPRXP5-201ENST00000604662 539 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 AC090425.2-201ENST00000608818 501 ntBASIC1.09□□□□□ -2.23
TTC28Q96AY4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TTC28Q96AY4 RNU6-167P-201ENST00000384292 106 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 RPL23AP47-201ENST00000408017 460 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC073901.1-201ENST00000462471 408 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC108120.2-201ENST00000512973 294 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 RNU6-56P-201ENST00000516986 93 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC239860.2-201ENST00000525886 270 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC109635.4-202ENST00000531666 412 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 PCNAP1-202ENST00000595299 752 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.09□□□□□ -2.24
TTC28Q96AY4 AC110491.1-201ENST00000562191 2010 ntBASIC1.09□□□□□ -2.24
TTC28Q96AY4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TTC28Q96AY4 RNU6-288P-201ENST00000363690 104 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC119618.1-201ENST00000434191 222 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC113155.1-201ENST00000511141 769 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 RN7SKP277-201ENST00000516895 283 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 MIR6864-201ENST00000617935 70 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC002550.2-201ENST00000621246 394 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AL121594.5-201ENST00000631724 573 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC010889.1-201ENST00000566193 2666 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 MTND5P10-201ENST00000603719 1809 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 SNORD56.5-201ENST00000364281 72 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC244636.1-201ENST00000421152 228 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC104308.1-201ENST00000454621 333 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC023424.2-201ENST00000493479 777 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms