Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SUB1P3-201ENST00000564581 315 ntBASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 RNU6-85P-201ENST00000605989 107 ntBASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 AC006065.5-201ENST00000623427 349 ntBASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 AC139769.1-204ENST00000472297 1931 ntBASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.44□□□□□ -1.54
VTI1AQ96AJ9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 ZNF285B-201ENST00000561698 1767 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC104260.2-201ENST00000623551 3497 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.39-201ENST00000362620 98 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RNA5SP447-201ENST00000363749 119 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RNU6-76P-201ENST00000384060 104 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RNU6-1026P-201ENST00000384465 108 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC097374.1-203ENST00000400783 485 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RPL23AP1-201ENST00000428990 471 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RPL21P2-201ENST00000440049 481 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AL450023.3-201ENST00000440592 271 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 PCNPP5-201ENST00000452246 481 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AL356981.1-201ENST00000454879 684 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RN7SL517P-201ENST00000462240 305 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC107222.1-201ENST00000510899 637 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 MIR1254-2-201ENST00000579553 63 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 RN7SL690P-201ENST00000582087 240 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AL355297.3-201ENST00000604082 446 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AL356218.2-201ENST00000605264 187 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AC062037.2-201ENST00000610137 73 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 AL353748.2-201ENST00000622148 471 ntBASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTI1AQ96AJ9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 SNORA73.1-201ENST00000363107 205 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 RNA5SP479-201ENST00000364858 117 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.396-201ENST00000383949 103 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 CHEK2P4-201ENST00000450340 246 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AL645939.1-201ENST00000453429 797 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 RPL31P60-201ENST00000478450 367 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AC087369.1-201ENST00000520775 996 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AC131281.1-201ENST00000522984 164 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 SNRPGP16-201ENST00000533275 226 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 HSBP1P1-201ENST00000555205 166 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AC022726.1-201ENST00000587475 207 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AL031601.2-202ENST00000622650 282 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 CR381572.2-201ENST00000624852 397 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 AL592182.3-201ENST00000642132 3304 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 DHX9P1-201ENST00000436565 3076 ntBASIC5.42□□□□□ -1.54
VTI1AQ96AJ9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 SNORD113.2-201ENST00000364166 89 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 DEFB109C-201ENST00000382575 264 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 DEFB109B-201ENST00000382656 264 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 SNORA70F-201ENST00000384142 135 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 Y_RNA.534-201ENST00000384599 112 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL357515.1-201ENST00000402967 542 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 U3.35-201ENST00000408405 208 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 BX276092.3-201ENST00000424182 230 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AL133396.1-201ENST00000432048 687 ntBASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.41□□□□□ -1.54
VTI1AQ96AJ9 S100A11P1-201ENST00000477525 312 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms