Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-1252P-201ENST00000363054 104 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 RNU6-1155P-201ENST00000363554 107 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 MIR135A2-201ENST00000384854 100 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 SKA2P1-201ENST00000425592 390 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.76□□□□□ -1.65
BRF1Q92994 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.76□□□□□ -1.65
BRF1Q92994 ELOCP24-201ENST00000456370 334 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 RPL21P103-201ENST00000479921 488 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 RPL31P61-201ENST00000496160 376 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC079140.5-201ENST00000507882 310 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC093303.1-201ENST00000514549 295 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC026801.2-201ENST00000515352 425 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 SNORA31.9-201ENST00000516429 84 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC022634.1-201ENST00000520765 532 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.76□□□□□ -1.65
BRF1Q92994 AC093012.1-202ENST00000549403 582 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC068446.3-201ENST00000555285 382 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.76□□□□□ -1.65
BRF1Q92994 MIR5690-201ENST00000583739 73 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC016925.2-201ENST00000605108 242 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC022893.3-201ENST00000607665 437 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC009570.1-201ENST00000609599 745 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AC012409.4-201ENST00000612923 249 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AL158196.1-201ENST00000616786 434 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 U73479.1-201ENST00000618062 168 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 OR52H1-202ENST00000641796 1061 ntBASIC4.76□□□□□ -1.65
BRF1Q92994 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRF1Q92994 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
BRF1Q92994 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRF1Q92994 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF1Q92994 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF1Q92994 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRF1Q92994 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRF1Q92994 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 Y_RNA.135-201ENST00000363439 95 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 RNU6-1188P-201ENST00000363795 107 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 SNORD116-11-201ENST00000383882 92 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 Y_RNA.482-201ENST00000384377 111 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 MIR141-201ENST00000384975 95 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 RNU6-837P-201ENST00000391056 108 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 RNU6-954P-201ENST00000411355 107 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 BX682237.1-201ENST00000415016 335 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 ATG3P1-201ENST00000419507 911 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF1Q92994 AC011742.1-201ENST00000431448 434 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 AC005019.1-201ENST00000436455 431 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 MTND3P2-201ENST00000438452 342 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 RPS26P15-201ENST00000488067 348 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 RPS27P27-201ENST00000498779 255 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF1Q92994 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.75□□□□□ -1.65
BRF1Q92994 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF1Q92994 SNRPGP18-201ENST00000553000 214 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF1Q92994 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 AC025884.1-201ENST00000556034 378 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 MTCO3P23-201ENST00000561363 289 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.75□□□□□ -1.65
BRF1Q92994 AC136443.5-201ENST00000603741 370 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AL138889.2-201ENST00000603883 242 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AC098657.3-201ENST00000620434 263 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 AL589994.2-201ENST00000621124 579 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 uc_338.22-201ENST00000622722 187 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.75□□□□□ -1.65
BRF1Q92994 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRF1Q92994 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
BRF1Q92994 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BRF1Q92994 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
BRF1Q92994 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF1Q92994 SNORA60-201ENST00000362396 134 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 RN7SKP224-201ENST00000364140 325 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 RNA5SP130-201ENST00000364431 114 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 MIR153-1-201ENST00000384914 90 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC108032.1-201ENST00000416706 207 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF1Q92994 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF1Q92994 TRBV1-201ENST00000476502 284 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.74□□□□□ -1.65
BRF1Q92994 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 AC090115.3-201ENST00000553218 849 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms