Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TM9SF4Q92544 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TM9SF4Q92544 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.2□□□□□ -1.9
TM9SF4Q92544 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 ELF2P3-201ENST00000445099 1506 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 FRG1CP-201ENST00000358464 769 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 RNA5SP295-201ENST00000362655 121 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 Y_RNA.111-201ENST00000363248 100 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 RNU6-335P-201ENST00000364563 113 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 MTCO3P40-201ENST00000392516 676 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 RPS15AP12-201ENST00000419498 388 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC233728.2-201ENST00000425348 757 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC133104.1-201ENST00000429100 218 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 MTND3P21-201ENST00000433774 331 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 TIMM9P1-201ENST00000436122 256 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 UBE2V1P13-201ENST00000436983 439 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 RBMX2P4-201ENST00000441256 376 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 RPL23AP55-201ENST00000498163 452 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC019235.1-201ENST00000503847 207 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 HMGB1P29-201ENST00000505659 499 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 Vault.3-201ENST00000516676 95 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 RNA5SP337-201ENST00000517007 109 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC022616.3-201ENST00000523940 148 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 MTCYBP41-201ENST00000528913 1123 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL133271.1-201ENST00000538229 291 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 CR383656.7-201ENST00000548164 174 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC092325.1-201ENST00000566449 554 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 OR4K8P-201ENST00000578842 1048 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 AP001429.1-201ENST00000602568 530 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL355812.1-201ENST00000603215 216 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AP000860.1-201ENST00000605250 559 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL136363.1-201ENST00000605349 337 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 MIR98-201ENST00000606724 119 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AC090970.3-201ENST00000612566 866 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 AL359880.1-201ENST00000621879 266 ntBASIC3.19□□□□□ -1.9
TM9SF4Q92544 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
TM9SF4Q92544 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TM9SF4Q92544 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RNU6-181P-201ENST00000363225 107 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 Y_RNA.256-201ENST00000364594 104 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 Y_RNA.409-201ENST00000383990 98 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 MIR181A1-201ENST00000385026 110 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 SNORD115-47-201ENST00000391226 86 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 MRPL42P2-201ENST00000403169 426 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RNU6-712P-201ENST00000410558 100 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RN7SKP53-201ENST00000411337 315 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 ISCA1P1-201ENST00000426679 387 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 MTCO2P19-201ENST00000427513 598 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL596276.1-201ENST00000434465 418 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 MTND4LP10-201ENST00000435146 291 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 RPL21P104-201ENST00000464143 478 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 RPL23AP41-201ENST00000484754 458 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 ARL4AP2-201ENST00000507378 601 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RNU6-445P-201ENST00000516949 107 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RN7SKP289-201ENST00000517244 295 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL133241.1-201ENST00000556832 487 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 ZNF519P2-201ENST00000557032 169 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms