Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTF1Q92541 Y_RNA.22-201ENST00000362492 102 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 Y_RNA.61-201ENST00000362835 102 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 RNU6-39P-201ENST00000384344 107 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 MIR153-1-201ENST00000384914 90 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RTF1Q92541 SNORD17-201ENST00000390930 237 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 RNU6-754P-201ENST00000391166 107 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AL354719.1-201ENST00000406535 843 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC006020.1-201ENST00000420179 1854 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 MTND5P1-201ENST00000445440 1375 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 SNRPGP5-201ENST00000456003 220 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.59□□□□□ -1.67
RTF1Q92541 snoU13.3-201ENST00000459441 104 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 RN7SL93P-201ENST00000463035 293 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.59□□□□□ -1.67
RTF1Q92541 RPL21P103-201ENST00000479921 488 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 MTCO1P9-201ENST00000505577 1534 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
RTF1Q92541 NARSP2-201ENST00000518524 679 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 HMGN1P28-201ENST00000521340 364 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.59□□□□□ -1.67
RTF1Q92541 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.59□□□□□ -1.67
RTF1Q92541 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.59□□□□□ -1.67
RTF1Q92541 AC008489.1-201ENST00000524271 483 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.59□□□□□ -1.67
RTF1Q92541 RAB11AP2-201ENST00000545905 639 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC011611.1-201ENST00000552179 197 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.59□□□□□ -1.67
RTF1Q92541 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTF1Q92541 AC005261.5-201ENST00000596280 355 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC093838.1-201ENST00000613014 469 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC093648.1-201ENST00000623546 606 ntBASIC4.59□□□□□ -1.67
RTF1Q92541 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.59□□□□□ -1.67
RTF1Q92541 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.59□□□□□ -1.67
RTF1Q92541 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.59□□□□□ -1.68
RTF1Q92541 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.58□□□□□ -1.68
RTF1Q92541 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 RNU6-223P-201ENST00000362830 107 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 Y_RNA.86-201ENST00000363020 111 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNU1-33P-201ENST00000364249 162 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNA5SP42-201ENST00000364278 115 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 Y_RNA.255-201ENST00000364581 97 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 Y_RNA.367-201ENST00000365544 101 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNU6-637P-201ENST00000384050 107 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNU6-432P-201ENST00000384196 109 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 MT-TD-201ENST00000387419 68 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 PTMAP5-201ENST00000393073 333 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 AC092447.6-201ENST00000414578 210 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 MTCO3P12-201ENST00000416718 547 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.58□□□□□ -1.68
RTF1Q92541 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.58□□□□□ -1.68
RTF1Q92541 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.58□□□□□ -1.68
RTF1Q92541 RPL7P28-201ENST00000437739 740 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 RN7SL594P-201ENST00000470590 287 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.58□□□□□ -1.68
RTF1Q92541 RPL32P34-201ENST00000486380 400 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.58□□□□□ -1.68
RTF1Q92541 AC114797.1-201ENST00000514003 728 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 AC105417.1-201ENST00000514691 285 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNA5SP401-201ENST00000515920 127 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNU2-27P-201ENST00000516185 142 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 RNU7-51P-201ENST00000516560 62 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 AC103783.1-201ENST00000520506 373 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.58□□□□□ -1.68
RTF1Q92541 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.58□□□□□ -1.68
RTF1Q92541 AC128657.1-201ENST00000549459 145 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.58□□□□□ -1.68
RTF1Q92541 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.58□□□□□ -1.68
RTF1Q92541 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.58□□□□□ -1.68
RTF1Q92541 AL354950.2-201ENST00000617939 290 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 U73479.1-201ENST00000618062 168 ntBASIC4.58□□□□□ -1.68
RTF1Q92541 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.58□□□□□ -1.68
RTF1Q92541 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTF1Q92541 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 AC090229.1-201ENST00000590983 1609 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.57□□□□□ -1.68
RTF1Q92541 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 RNU6-996P-201ENST00000365438 107 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 MIR454-201ENST00000390180 115 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RTF1Q92541 RNU6-1068P-201ENST00000410958 103 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC006989.1-201ENST00000427212 131 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 OR2AS1P-201ENST00000427827 319 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 OR4K11P-201ENST00000431829 904 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 ELOCP23-201ENST00000452014 332 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.57□□□□□ -1.68
RTF1Q92541 CACYBPP2-201ENST00000453625 678 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.57□□□□□ -1.68
RTF1Q92541 AC078785.3-201ENST00000476607 425 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms