Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC098799.2-201ENST00000509466 868 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 MTCYBP43-201ENST00000513621 740 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 Y_RNA.702-201ENST00000516843 96 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC239860.2-201ENST00000525886 270 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 MIR4769-201ENST00000584126 77 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AP000907.4-201ENST00000604143 237 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC098614.4-201ENST00000607601 462 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC006023.2-201ENST00000609916 167 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC091834.1-201ENST00000614543 472 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC138649.3-201ENST00000622154 254 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNED1Q8TER0 RNA5SP289-201ENST00000362332 137 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 MIR518C-201ENST00000384822 101 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 TMSB4XP8-201ENST00000402089 135 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC068533.2-201ENST00000411872 306 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 RPL17P12-201ENST00000413391 526 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 OR51A3P-201ENST00000413596 924 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 TMSB4XP6-201ENST00000415187 135 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 TMSB4XP1-201ENST00000424567 135 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 UBE2FP3-201ENST00000436366 524 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 SNORD42A-201ENST00000459584 64 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 RPL21P104-201ENST00000464143 478 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 UBL5P3-201ENST00000475112 231 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 HMGB1P36-201ENST00000487709 576 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC117522.1-201ENST00000509821 380 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC008413.1-201ENST00000511864 177 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC022483.1-201ENST00000514020 567 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 AP001189.2-201ENST00000527320 189 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AP001646.1-201ENST00000527936 915 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC012182.1-201ENST00000570133 895 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 SNRPGP15-201ENST00000600149 222 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC092650.2-201ENST00000619984 902 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 AC099654.5-201ENST00000636479 350 ntBASIC3.34□□□□□ -1.88
SNED1Q8TER0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SNED1Q8TER0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC107982.1-201ENST00000507171 1300 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AF127577.6-201ENST00000623352 2191 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 RNU6-839P-201ENST00000363347 108 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 Y_RNA.256-201ENST00000364594 104 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 SNORA40.3-201ENST00000390964 122 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 RPS4XP7-201ENST00000406274 780 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC073264.1-201ENST00000411508 416 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 USP12PX-201ENST00000432383 1057 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNED1Q8TER0 HMGB1P31-201ENST00000437242 427 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC244505.5-201ENST00000443639 207 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 NFU1P2-201ENST00000448700 469 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AL033528.1-201ENST00000453780 140 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 KLF3P2-201ENST00000465138 268 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AP000797.1-201ENST00000478870 387 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC105252.1-201ENST00000503089 286 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC048346.1-201ENST00000510247 144 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC016065.2-201ENST00000514530 444 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 SNORD53-201ENST00000579969 78 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNED1Q8TER0 AL158209.2-201ENST00000619266 216 ntBASIC3.33□□□□□ -1.88
SNED1Q8TER0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SNED1Q8TER0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNED1Q8TER0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNED1Q8TER0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.32□□□□□ -1.88
SNED1Q8TER0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms