Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 SAGE4P-201ENST00000442271 3381 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AL450345.1-202ENST00000605741 3881 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC009229.4-201ENST00000623854 1947 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RAD17P1-201ENST00000418130 2042 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC126755.2-208ENST00000327792 462 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC138969.1-213ENST00000331436 462 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 SNORA25.1-201ENST00000362326 128 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RNU1-130P-201ENST00000363930 160 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RNU6-312P-201ENST00000364629 107 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RNA5SP455-201ENST00000365190 119 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.569-201ENST00000384749 103 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RNU6-607P-201ENST00000411283 108 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 PTGES3P4-201ENST00000426243 356 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MTATP6P4-201ENST00000427725 675 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 TBCAP1-201ENST00000436520 327 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AL137159.1-201ENST00000452808 512 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC010631.1-201ENST00000474150 156 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RN7SKP60-201ENST00000516985 239 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC021006.3-201ENST00000530771 192 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC104581.2-201ENST00000572227 430 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MIR5096-201ENST00000583713 70 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC123786.2-201ENST00000603459 275 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 TUG1_2.1-201ENST00000614234 87 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 AC084757.4-201ENST00000616350 526 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 SNORD39.4-201ENST00000620099 78 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 ADAM5-202ENST00000399789 1942 ntBASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NKX2-3Q8TAU0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.44
NKX2-3Q8TAU0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 RPL9P7-201ENST00000330965 580 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AC079809.1-201ENST00000415468 276 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AL513043.1-201ENST00000439124 535 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 NUTF2P7-201ENST00000453086 375 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 RNA5SP43-201ENST00000516559 110 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 BNIP3P5-201ENST00000562290 498 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AC009318.2-201ENST00000610917 651 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 MIR8076-201ENST00000611401 83 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 Y_RNA.778-201ENST00000620203 90 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 AC233981.2-201ENST00000611524 1614 ntBASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX2-3Q8TAU0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 RNA5SP505-201ENST00000364748 108 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC068538.1-201ENST00000376856 336 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AL162389.1-201ENST00000449233 177 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 IGHV5-78-201ENST00000450948 295 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 TGIF1P1-201ENST00000558095 802 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 NF1P5-201ENST00000588287 448 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC067852.3-201ENST00000589177 561 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC005191.1-201ENST00000603950 358 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC008785.1-201ENST00000624475 456 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms