Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 RNA5SP200-201ENST00000516360 103 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AP000889.2-201ENST00000532684 490 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AC087894.1-201ENST00000538359 518 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 AL391261.3-201ENST00000557194 520 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AC009127.3-201ENST00000570531 403 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 RPS15AP11-201ENST00000594193 385 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 MTND4P35-201ENST00000604257 1375 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AL357080.1-201ENST00000617394 239 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AC073592.7-201ENST00000623659 507 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.55□□□□□ -2
CCDC148Q8NFR7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC148Q8NFR7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.55□□□□□ -2
CCDC148Q8NFR7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC148Q8NFR7 RNU5E-8P-201ENST00000363502 116 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 RNU6-359P-201ENST00000365466 108 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AL139413.1-201ENST00000421309 217 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 IFNA11P-201ENST00000446352 526 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 ARPC3P5-201ENST00000448802 534 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 snoU13.8-201ENST00000458890 104 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC004263.1-201ENST00000479327 332 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 RNA5SP291-201ENST00000517222 105 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 SLC2A13P1-201ENST00000531560 322 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AL136520.1-202ENST00000555494 763 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC026464.5-201ENST00000562497 722 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 MIR3912-201ENST00000577566 105 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC148Q8NFR7 AP005901.5-201ENST00000545779 1796 ntBASIC2.54□□□□□ -2
CCDC148Q8NFR7 AL603865.2-201ENST00000401679 213 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 RNU2-42P-201ENST00000410697 113 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 TPMTP2-201ENST00000414372 726 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC007435.1-201ENST00000421086 415 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AL139421.1-201ENST00000423010 169 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC007560.1-201ENST00000426912 237 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AL035407.1-201ENST00000429211 571 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 RPS20P20-201ENST00000460498 340 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 HMGB1P28-201ENST00000507778 552 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC007115.1-201ENST00000546853 234 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC099785.1-201ENST00000605697 437 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC018926.1-201ENST00000616335 435 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC064859.1-201ENST00000624741 174 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC093591.3-201ENST00000634516 308 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 MTND5P6-201ENST00000422338 1798 ntBASIC2.53□□□□□ -2
CCDC148Q8NFR7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CCDC148Q8NFR7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CCDC148Q8NFR7 DDX10P1-201ENST00000448545 1933 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 Y_RNA.234-201ENST00000364409 97 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 RPS20P22-201ENST00000473700 357 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AC022447.1-201ENST00000515358 464 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 RNU6-1225P-201ENST00000516336 65 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 RN7SKP31-201ENST00000516354 278 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 IGLV3-17-201ENST00000519099 244 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 NDUFS5P6-201ENST00000529136 295 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 HMGN2P15-201ENST00000585707 270 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AP002802.2-201ENST00000605877 235 ntBASIC2.52□□□□□ -2.01
CCDC148Q8NFR7 AC120053.1-201ENST00000607706 736 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms