Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 GDI2P1-201ENST00000429312 1336 ntBASIC2.09□□□□□ -2.08
CCDC112Q8NEF3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 CCT4P2-201ENST00000233836 1548 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 MTCO1P23-201ENST00000415223 1526 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 Z85995.1-201ENST00000415547 335 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 SFR1P2-201ENST00000421841 730 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC007560.1-201ENST00000426912 237 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 Z98742.2-201ENST00000431564 187 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AL512661.1-201ENST00000434586 1253 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC118282.2-201ENST00000508739 374 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 RNU6-885P-201ENST00000516607 104 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC015712.3-201ENST00000559380 164 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 AL158801.5-201ENST00000623123 465 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 OR1S1-201ENST00000624470 978 ntBASIC2.08□□□□□ -2.08
CCDC112Q8NEF3 MTND5P29-201ENST00000458676 1807 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 MTCO2P31-201ENST00000402702 684 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RNU2-47P-201ENST00000410649 186 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RNU2-15P-201ENST00000410692 191 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RPS7P9-201ENST00000414704 586 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AL121882.1-201ENST00000422893 417 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC241584.1-201ENST00000438469 1241 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RPL26P6-201ENST00000440913 438 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 MTCO3P43-201ENST00000440974 771 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RPS20P22-201ENST00000473700 357 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 MTAPP1-201ENST00000489154 819 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC113420.1-201ENST00000507903 571 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC100814.1-201ENST00000606963 623 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AC068057.2-201ENST00000624047 895 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 AL590396.4-201ENST00000636779 956 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 ZNF72P-201ENST00000425869 1908 ntBASIC2.07□□□□□ -2.08
CCDC112Q8NEF3 ZNF849P-201ENST00000594711 1566 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 RNU6-353P-201ENST00000364266 108 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 RNA5SP88-201ENST00000365560 109 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 NPM1P10-201ENST00000398310 865 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AL079342.1-201ENST00000401460 267 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 GSTA9P-201ENST00000406231 611 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 MIR1290-201ENST00000408735 78 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 RNU6-575P-201ENST00000411326 105 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AL136133.1-201ENST00000413694 376 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 SPA17P1-201ENST00000416656 452 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AL109913.1-201ENST00000421173 514 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 PSPHP1-201ENST00000450062 261 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AP005902.1-201ENST00000521358 186 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 CYCSP26-201ENST00000534107 320 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 SETP7-201ENST00000552169 453 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AC093519.1-201ENST00000566109 298 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 BNIP3P10-201ENST00000605360 577 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 AC025754.2-201ENST00000606491 432 ntBASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC112Q8NEF3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms