Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 RPS20P20-201ENST00000460498 340 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC004263.1-201ENST00000479327 332 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 EIF4EP3-201ENST00000498782 656 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 HMGB1P28-201ENST00000507778 552 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 RNU6-1225P-201ENST00000516336 65 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 SCARNA16.3-201ENST00000516595 184 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 NDUFS5P6-201ENST00000529136 295 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 MIR5694-201ENST00000581190 76 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC135507.1-201ENST00000607214 561 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC107294.1-201ENST00000609524 467 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AC013562.2-201ENST00000611632 603 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AL357080.1-201ENST00000617394 239 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 AL603758.1-201ENST00000618654 241 ntBASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ZIC4Q8N9L1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC007435.1-201ENST00000421086 415 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 MRPS36P1-201ENST00000421291 307 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 Z82209.1-201ENST00000422141 2135 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC007919.1-201ENST00000429380 217 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 WARS2P1-201ENST00000429678 537 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 SNORD121B-201ENST00000458838 81 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 NDUFB4P2-201ENST00000509515 391 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 MIR3912-201ENST00000577566 105 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 HMGN2P15-201ENST00000585707 270 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AL356280.1-201ENST00000603614 379 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 AC120053.1-201ENST00000607706 736 ntBASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZIC4Q8N9L1 ZNF720P1-201ENST00000562403 1939 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 Y_RNA.110-201ENST00000363220 99 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU6-1078P-201ENST00000364522 103 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU6-637P-201ENST00000384050 107 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU6-1072P-201ENST00000384703 107 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU6-443P-201ENST00000384780 107 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 MTCO1P56-201ENST00000401674 224 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU2-33P-201ENST00000410344 192 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RN7SKP223-201ENST00000410582 62 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 TPMTP2-201ENST00000414372 726 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 C1DP1-201ENST00000426049 402 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AL591719.1-201ENST00000444669 744 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC002381.1-201ENST00000447049 280 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC233279.1-201ENST00000455300 423 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 MRPS17P3-201ENST00000465453 385 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RPS20P22-201ENST00000473700 357 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC108734.3-201ENST00000481241 1165 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC090096.1-201ENST00000489168 390 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC105252.1-201ENST00000503089 286 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RNU6-583P-201ENST00000516012 92 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 SCARNA11.3-201ENST00000517276 130 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 LRRC37A5P-203ENST00000580181 585 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AC084824.5-201ENST00000612009 413 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AL449363.1-201ENST00000617815 186 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 AP003485.1-201ENST00000625093 753 ntBASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
ZIC4Q8N9L1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms